KEGG   Variovorax sp. PMC12: C4F17_04265
Entry
C4F17_04265       CDS       T05380                                 
Name
(GenBank) cysteine desulfurase
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00450  Selenocompound metabolism
vam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    C4F17_04265
Enzymes [BR:vam01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     C4F17_04265
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     C4F17_04265
SSDB
Motif
Pfam: Aminotran_5 Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP SelA
Other DBs
NCBI-ProteinID: AVQ84463
UniProt: A0A2P1VH08
LinkDB
Position
1:915715..917550
AA seq 611 aa
MASAMFSEVPGAQFPANVAPPGSPLVSPAGFGPSVPGTPIPQGHIPGANLVPASPTQLPS
LANRAPALLPHAVAGNGVPDSVLSVAPAFEPRSGGSVLGVPQQVNAPSAPQPAASPFYFV
GNSFGHPSAGATQGIAIHDPFAGLEMPQPAAPVSPPSPSMAPAGRDAQFYFVDAVRLPNG
FVTPAKPDPRGPDAVPLAGSGQHPPFDVHAVRRDFPILKERVNGKQLVWFDNAATTHKPQ
SVIDRIAYFYEHENSNIHRAAHELAARATDAYEGARERVRKFINAPEVEEVIFVRGTTEA
INLVAKSWGGQHVGEGDEIIVSNLEHHANIVPWQQLAAAKGAKLRVIPVDDSGQVLLDEY
RKLLNDRTKIVAVTQVSNALGTVVPVKEIVELAHRAGARALVDGAQSVSHMRVDVQDIGA
DFFVFSGHKVFGPTGIGVVWGKREVLEDMPPWQGGGNMIADVTFEKTVFQPIPNKFEAGT
GNIADAVGLGAAIDYVNKVGIENIARYEHDLLVYGMAQLGAIPGVRLIGTAADKASVMSF
VLDGYATEEVGHALNDEGIAVRTGHHCAQPILRRFGVETTVRPSLAFYNTFDEIDRLVAV
VRRLAGQRRAG
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggccagcgccatgttctccgaggtgccgggcgcgcagtttcccgccaacgtcgcgccg
ccgggctcgccgctggtgagccccgcgggcttcgggccgagcgtgccgggcaccccgatt
ccgcaggggcatattccgggcgccaacctggtgccggcatcgcccacgcagttgccgtcg
cttgccaatcgcgcgcctgccttgctgccgcatgcggtggcgggcaacggcgtgccggac
agcgtgctgtcggtggcgccggctttcgagccgcgctcgggcggctcggtgctgggcgtg
ccgcagcaggtgaatgcgccttcggcaccgcagccggcagcgtcgccgttctacttcgtg
ggcaacagcttcgggcatccttccgctggcgccacgcagggcattgcaattcacgatccg
ttcgctggccttgaaatgccgcaaccggctgcgccggtttcgccgccgagcccgtcgatg
gcgcccgccggtcgcgacgcacagttctatttcgtcgatgcggtgcgcctgcccaacggc
ttcgtcacgccggccaagcccgatccgcgcggccctgacgccgtgccactggcgggcagc
ggccagcatccgccgttcgacgtccatgccgtgcggcgagactttccgatcctcaaggag
cgggtgaacggcaagcagctcgtgtggttcgacaacgcggccaccacgcacaagccgcag
tctgtcatcgaccgcatcgcgtatttctacgagcacgagaactcgaacatccatcgtgcc
gcccatgaactggccgcgcgcgcaaccgacgcctatgaaggtgcgcgcgaacgcgttcgc
aagttcatcaacgcgccggaagttgaagaggtgatcttcgtgcgcggcaccaccgaggcc
atcaacctcgtggccaagagctggggcgggcagcacgtgggcgagggcgacgagatcatc
gtctccaacctcgaacatcacgccaacatagtgccttggcagcagctagccgcggccaag
ggcgcgaagctgcgcgtgattccggtggacgattcgggccaggtgctgctcgacgaatac
cgcaagctgctcaacgaccgcacgaagatcgtggccgtcacgcaggtgtcgaatgcgctg
ggcacggtggtgcctgtgaaggagatcgttgaattggcgcaccgcgcgggtgccagggcg
ctggtcgacggcgcgcagtcggtatcgcacatgcgcgtggacgtgcaggacatcggcgcc
gatttcttcgtcttctccggccacaaggtgttcggtccgaccggcatcggcgtggtctgg
ggcaagcgtgaagtgctcgaagacatgcctccgtggcagggcggcggcaacatgattgcc
gacgtgaccttcgagaaaaccgtgttccagccgatcccgaacaagttcgaggccggcacc
ggcaacatcgccgacgcggtgggcctgggcgcggcgatcgactacgtcaacaaggtcggc
atcgagaacatcgcgcgctatgagcatgacctgctggtgtacggcatggcgcagctcggc
gcgatccctggcgtgcggctgatcggcacggcggccgacaaggccagcgtgatgtccttc
gtgctcgacgggtacgccaccgaggaagtgggccatgcgctgaacgacgaaggaatcgcg
gtgcgcaccggccaccactgcgcgcagccgatcctgcggcgcttcggcgtcgagaccacg
gtgcggccgtcgctggcgttctacaacaccttcgacgagatcgatcggctggtggctgtg
gtgcggcggctggcggggcagcggcgggcagggtag

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