KEGG   Variovorax sp. PMC12: C4F17_06435
Entry
C4F17_06435       CDS       T05380                                 
Name
(GenBank) LexA repressor
  KO
K01356  repressor LexA [EC:3.4.21.88]
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vam01002]
    C4F17_06435
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vam03400]
    C4F17_06435
Enzymes [BR:vam01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.88  repressor LexA
     C4F17_06435
Peptidases and inhibitors [BR:vam01002]
 Serine peptidases
  Family S24: LexA family
   C4F17_06435
DNA repair and recombination proteins [BR:vam03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    C4F17_06435
SSDB
Motif
Pfam: Peptidase_S24 LexA_DNA_bind HTH_20 Sigma70_r4 Rrf2 HTH_Crp_2 LTXXQ Polysacc_synt_2 Par3_HAL_N_term RelE
Other DBs
NCBI-ProteinID: AVQ80618
UniProt: A0A2P1V632
LinkDB
Position
1:1396250..1396933
AA seq 227 aa
MQFAVKLTARQQQILDLIQSAIARTGAPPTRAEIANELGFKSANAAEEHLQALARKGVIE
LVSGTSRGIRLKGDALRSLNETRHREGGQFSLSLPGMAQLALPLIGRVAAGSPILAQEHV
DQTYYVENTLFQRQPDYLLKVRGMSMRDAGIMDGDLLAVQATKEARNGQIVVARLGDEVT
VKRLKRNKQVIELHAENPDYPTIIVQPGEPFEIEGLAVGLIRNTMLM
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcagttcgccgtgaagcttacagcccgccagcagcagatcctggacttgatccagagc
gccatcgcccgaaccggcgcgccacccacgcgcgccgaaatcgccaatgaactcgggttc
aagtcggccaacgcggccgaagagcacctgcaggcattggcccgcaagggtgtcatcgaa
ctcgtcagcggcacttcgcgaggcatccgcctcaagggcgacgccctgcgctcgctgaac
gaaacgcgccaccgcgaaggcggccagttctcgctctcgctgcccggcatggcgcaactg
gcgctgccgctcatcggccgcgtcgccgcgggctcgcccatcctggcgcaggagcacgtc
gaccagacctactacgtcgagaacacactgttccagcgccagcccgactacctgctcaag
gtgcgcggcatgtccatgcgcgacgccggcatcatggacggcgacctgctcgccgtgcag
gccaccaaggaagcgcgcaacgggcagatcgtggtggcgcgcctgggcgacgaggtcacc
gtcaagcgcctgaaacgcaacaagcaggtcatcgagctgcacgccgagaaccccgactac
ccgaccatcatcgtccagcccggcgagcccttcgagatcgaaggcctcgccgtgggcctc
atccgcaacaccatgctgatgtag

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