Variovorax sp. PMC12: C4F17_06865
Help
Entry
C4F17_06865 CDS
T05380
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00860
Porphyrin metabolism
vam01100
Metabolic pathways
vam01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
C4F17_06865
Enzymes [BR:
vam01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
C4F17_06865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
AVQ80690
UniProt:
A0A2P1V6B1
LinkDB
All DBs
Position
1:complement(1486696..1490715)
Genome browser
AA seq
1339 aa
AA seq
DB search
MTRVLFWLFGALATLGLLASAHAQPAGGRVVVLGTSLVSPARVVRLEAAAREAGLPLQVV
SASKDSPETLAAALEGARLLVIDAPHISVAQAAAARFGDVISRGAVPYVLVGEFALVAKG
QASAPAPLAAERGVDAAWAQRLREYWRFSGAANLAASMQALARPGDSAGLPAPVPLPLAG
LYHPGWPRIETDIAALDRLPGDPASGTVAVAINSATVTGDDTGWLDALIAALEQRGLRAY
AFYGPRQQKDLFVGMTHAGDRRVADLIVNASLVFSPNERKAELERIGVPVLQTLPSLAMD
ATQWAQSKDGLAQADIASYYSPSELAGMTDPMLVSARDAASGTLQPLPVQIDAVAAKAAA
LLRLQRTPASQRRVAMLVYNYPPGEANFGASFLNVPRSVSNMLAAMKSAGYSTELPGADA
LIAQVQATMKAYYPTGQDDALQPLLERGLADAMPLSRYLAWFRALPAETQRRIEAYWGPP
EKSTMLRPVAGEPAFVIPRVRFGNVVVLRQPPRFEPGTQVVDKARQVCHRSAVPLSHGYL
ATYLWLRTQFGASAVVHVGTHGTLEWSAGKERGLSVQDDPLLALGDLPNVYPYIMDNLGE
ATTAKRRGRATMVSHSTPMFAPAGFRPGVQAMHERMHDWETLSPGPVKTAMERQLTAEFA
EQHYDRDLQWTPARIRADFAGFIAVLHPYLDELAQTAQPLGLATFGQAPDAERRRMTILQ
ILGKPLVEALGEDIDEAFLIDAKNVAGSRPARWVELALSDPAAASAMGKSPADVQKLGEL
AGRAGKLDAVLAHNEEIEGLLTALDGRYLKSSYGGDPVRNPDSLPTGRNLYGFDPSRVPT
RAAWETGVAAMDAWIAEHAKSHGGKTPGKIAFTLWAGEASRHQGVLESQAFYAMGVKPRW
DDAGRMSGIEVIPAQVLGRARMDVLVSVTGSYRDQFPNVMRWLDEAVRQVAALPEPGNAV
AKHSDALAARLRAQGATPEEARRWSTARVFSNEQGSYGAGLEEAALASDAWKRQQRGGGD
AQMAQLYMDRMGHAYGKGLDGAARPGAYAGNLAQVDAALMARSSNLYGVLTNDDPFQYLG
GIAQAVRQLTGKDPALYVQNLRDGTAVRTDTAAGAIAREMQTRYLHPQWIAAQKAEGYSG
TLQVLKTAQFLWGWQVTAPDAVRQDQWQSLHDVYVRDRYRLGTREWLEGDNRAAFAQTLE
RMLDAVRLNYWKPDAATRRELVRAYAEAARATGLRERNDGVQRFVRQQLAAPAAPVAQAA
PVVPVVAAPPVPAPAKVAAAEPVADGAQPVSGLRLEPTPDTPPAPKAESVVLRLWVVFGA
ALLVALGALAQWRRGRAAA
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgggttctcttctggctgttcggggccctggcgacgctgggccttctggcgtcg
gcccatgcacagccggcgggcgggcgcgtggtggtgctgggcacctcgctggtgtcgccg
gcgcgggtggtccggctggaggcggcggcgcgcgaggcggggctgccgctgcaggtggtg
tcggcttcaaaggattcgcccgagacgctggcggccgcgctcgaaggtgcgcggctgctc
gtcatcgatgcgccgcacatcagcgtggcgcaggctgccgccgcccgcttcggtgacgtg
atttcgcgcggcgccgtgccctatgtgctggtcggcgagttcgcgctcgtcgccaagggg
caggcctccgcccccgcgccgctggcggcggaacgcggcgtcgatgccgcctgggcgcag
cggctgcgcgagtactggcgcttttccggagcggccaaccttgccgcgtcgatgcaggcg
ctggccaggcccggcgattcggcggggcttccggcgccggtgccgctgccgctcgccggc
ctctatcaccccggctggccgcgcatcgaaaccgacattgctgcgctagaccgtctgccc
ggcgatcccgcaagcggcaccgtcgccgtggccatcaacagcgccactgtcaccggcgac
gacaccggctggctcgacgcgctcatcgctgcgctggagcagcgcggcctgcgcgcctat
gcgttctacggcccgcgccagcagaaggacctgttcgttggcatgacgcatgccggcgac
cggcgcgtggccgacctgatcgtgaatgcctcgctggtgttcagccccaacgagcgcaag
gccgagctcgaacgcatcggcgtgcccgtgctgcagacgctgccctcgctggcgatggac
gcaacgcaatgggcccagagcaaggacggtctcgcgcaggccgacatcgcctcttactac
agccccagcgagctggccggcatgaccgacccgatgttggtgagcgcgcgcgacgccgca
tcgggcacgctgcagccgctgcccgtgcagatcgacgccgtggcggccaaggccgccgcg
ctgctgcggctgcagcgcacgccggcgtcgcagcggcgcgtggcgatgctggtctacaac
tacccgccgggcgaggccaatttcggcgcgtcgttcctcaacgtgccgcgcagcgtgagc
aacatgctcgcggcgatgaagtccgccggctacagcaccgagctgccgggcgccgacgcg
ctgatcgcgcaggtgcaggcgaccatgaaggcctactaccccacagggcaggacgacgcc
ctgcagccgctgctggagcggggactggccgacgcgatgccgctgtcgcgctacctcgcg
tggttccgcgcgctgcccgccgagacgcagcggcgcatcgaggcctactgggggccgccg
gaaaaatcgaccatgctgcgccccgttgcgggcgagccggcgttcgtgattccgcgcgtg
cgcttcggcaatgtcgtggtgctgcgccagccgccgcgcttcgagcccggcacgcaggtc
gtggacaaggcccggcaggtctgtcaccgctcggccgtgccgctgagccacggctacctg
gccacctacctgtggctgcgcacgcagttcggcgcgagcgcggtggtgcatgtgggcacg
cacggcacgctcgaatggtcggcgggcaaggagcgcgggctgtcggtgcaggacgatccg
ctgctcgcgctgggcgacctgccgaacgtgtacccgtacatcatggacaacctcggcgag
gccaccaccgccaagcggcgcggccgcgcgacgatggtgagccattcgacgccgatgttc
gcgcccgccggtttccgccccggcgtgcaggccatgcacgagcgcatgcacgactgggag
accctgtcgcccgggccggtgaagacggccatggaaaggcagctgacggccgagttcgcc
gagcagcactacgaccgcgacctgcaatggacgcccgcgcgcatccgcgccgacttcgcg
ggcttcatcgcggtgctgcatccgtacctcgacgaactcgcgcagaccgcgcagccgctg
ggcctggccaccttcggccaggcgcccgatgccgaacgccgccgcatgacgatcctgcag
atcctcggcaagccgctggtggaagcgctgggcgaggacatcgacgaggcttttctcatc
gatgcgaagaacgtggccggctcgcggcctgcgcgctgggtcgaactcgcgctgagcgac
cccgcagccgcgagcgccatgggcaagtcgccggccgacgtgcagaagctgggcgaactg
gccgggcgcgccggcaagctcgacgcagtgctcgcgcacaacgaggaaatcgaaggcctg
ctgaccgcactggacggccgctacctcaagtccagctacggcggcgacccggtgcgcaac
cctgacagcctgccaaccggccgcaacctctacggcttcgacccgagccgcgtgcccacg
cgcgcggcatgggaaacgggcgtggccgccatggacgcctggatcgccgagcatgcgaag
agccacggcggcaagacgcccggcaagatcgcgttcacgctttgggccggcgaggcttcg
cgccatcagggcgtgctcgaaagccaggccttctacgcgatgggcgtgaagccgcgctgg
gacgacgcgggccgcatgagcggcatcgaagtgattccggcgcaggtgctggggcgtgcg
cgcatggacgtgctggtcagcgtgaccggctcctaccgcgaccagttcccgaacgtgatg
cgctggctcgacgaggcggtacggcaggtagctgccttgcccgaacccggcaacgcggtg
gcgaagcacagcgatgcgctggccgcgaggctgcgcgcgcaaggcgctacgccggaggag
gcgaggcggtggtcgaccgcgcgcgtgttctcgaacgagcagggcagctacggcgccggg
ctcgaagaggccgcgctcgcgagcgatgcgtggaagcgccagcagcgcggcggcggcgac
gcgcagatggcgcagctctacatggaccgcatgggccacgcctacggcaagggcctcgac
ggggctgcgcggcccggcgcctatgcgggcaacctggcgcaagtggacgcggcgctgatg
gcgcgcagctccaatctctatggcgtgctcaccaacgacgatcccttccagtacctcggc
ggcatcgcgcaggcggtgcggcagctcaccggcaaggacccggcgctgtacgtgcagaac
ctgcgcgacggcacggcggtgcgcaccgacaccgccgccggtgccatcgcccgcgagatg
cagacgcgctacctgcatccgcagtggatcgccgcgcagaaggccgagggctacagcggc
acgctgcaggtgctgaagacggcgcagttcctctggggctggcaggtcaccgcgcccgac
gccgtgcggcaggaccagtggcagtcgctgcacgacgtgtacgtgcgcgacagatacagg
ctgggcacgcgcgaatggctcgagggcgacaaccgcgctgcgttcgcgcagacgctggag
cgcatgctcgatgcggtgcggctgaactactggaagccggacgcagccacgcgccgggaa
cttgtgcgtgcgtatgccgaggcggcgcgggccaccggcctgcgcgagcggaacgacggc
gtgcagcggttcgtgcggcagcagcttgccgcgccggcagcgcccgtcgcgcaggccgcg
ccggtcgtgccggtggtcgcggccccgccggtgcctgcacccgccaaggtcgctgcggcc
gagcccgtggccgacggcgcgcaacccgtgagcggcctcaggctcgaacccacgcccgat
acgcccccggcgcccaaggccgaatccgtcgtcctgcgcctgtgggtcgtgttcggcgcc
gcattgctggtcgcgctcggcgcgttggcgcagtggcggcgcggcagggcggccgcctga
DBGET
integrated database retrieval system