Variovorax sp. PMC12: C4F17_07030
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Entry
C4F17_07030 CDS
T05380
Symbol
fumC
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00020
Citrate cycle (TCA cycle)
vam00620
Pyruvate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4F17_07030 (fumC)
00620 Pyruvate metabolism
C4F17_07030 (fumC)
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
C4F17_07030 (fumC)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
AVQ80721
UniProt:
A0A2P1V6G6
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Position
1:complement(1522174..1523571)
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AA seq
465 aa
AA seq
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MTTSPKTRAERDTFGPIDVPADKLWGAQTQRSLQNFDISGEQQPREIIKALAQVKRASAV
VNHALGLQDEKKTNAIVAAADEVIAGKHPGEFPLVVWQTGSGTQTNMNVNEVLANRASEL
LGGERGEGRLVHPNDDVNRSQSSNDVFPTAMHVAAVEAITHKLLPAIAKLRGTLEQKSKD
FADIVKIGRTHLQDATPLTLGQEFSGYVAQLAHGEAHVRAALPHLSELALGGTAVGTGLN
APKGYAEQVAAELAKITGLPFVTAPNKFEAMASVDALVHAHGALKTLAASMNKIANDVRW
LASGPRSGIGELSIPENEPGSSIMPGKVNPTQSEAVTMLAAQVFGNDVAINIGGASGNFE
LNVFRPMVAHNFLQSVRLLADGMVSFNDHCAVGIEPNRERITELVQRSLMLVTALNTHIG
YDKSAYIAKKAHKEGTSLREAAIASGHLTAEQFDEWVVPENMTGR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcccccaagacccgtgccgagcgcgacaccttcggaccgatcgacgtgccg
gccgacaagctgtggggcgcgcaaacgcagcgctcgctgcagaacttcgacatttccggc
gagcagcagccgcgcgaaatcatcaaggcgctggcccaggtgaagcgggcttcggccgta
gtcaaccacgcgctggggctgcaggacgagaagaagaccaacgccatcgtggcggcagcc
gacgaagtcatcgccggcaagcacccgggcgagttcccgctggtggtctggcagaccggc
tcgggcacccagaccaacatgaacgtcaacgaggtgctggccaaccgcgcgagcgagttg
ctcggcggcgagcgcggcgaaggccggctcgtgcacccgaacgacgacgtgaaccgcagc
cagtcgagcaacgacgtgttcccgaccgccatgcacgtggccgcggtggaggccatcacg
cacaagctgctgccggccatcgccaagctgcgcggcacgctggagcagaagtcgaaggac
ttcgcggacatcgtgaagatcggccgcacccacctgcaggacgccacgcccctcacgctg
ggccaggagttctcgggctatgtggcgcaactggcgcatggcgaggcgcacgtgcgcgcc
gcgctgccgcacctgagcgaactggcgctgggcggcacggccgtcggcaccgggctcaat
gcgcccaagggctacgcggagcaggtggccgccgagctggcgaagatcaccggcctgccg
ttcgtgaccgcgccgaacaagttcgaagccatggccagcgtcgatgcgctggtgcacgcg
cacggcgcgctgaagacgctggcggccagcatgaacaagatcgccaacgacgtgcgctgg
ctggccagcggcccgcgcagcggcatcggcgaactgagcatcccggaaaacgagccgggc
tcgtcgatcatgccgggcaaggtcaacccgacccagagcgaggccgtcacgatgctggcc
gcgcaggtgttcggcaacgacgtggccatcaacatcggtggcgcatcgggcaacttcgag
ctgaacgtgttccgccccatggtcgcgcacaacttcctgcagagcgtgcgcctgctggcc
gacggcatggtgagcttcaacgaccactgcgcggtgggcatcgagccgaaccgcgaacgc
atcaccgagctggtgcagcgctcgctgatgctggtgacggcgctgaacacgcacatcggc
tacgacaagtcggcctacatcgccaagaaggcgcacaaggaaggcaccagcctgcgcgaa
gcggcgatcgcctcgggccacctgacggccgagcagttcgatgaatgggtggtgccggag
aacatgaccggccgctga
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