Variovorax sp. PMC12: C4F17_07050
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Entry
C4F17_07050 CDS
T05380
Name
(GenBank) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00020
Citrate cycle (TCA cycle)
vam00620
Pyruvate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vam_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C4F17_07050
00620 Pyruvate metabolism
C4F17_07050
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
C4F17_07050
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
RXLR_WY
Motif
Other DBs
NCBI-ProteinID:
AVQ80725
UniProt:
A0A2P1V6B9
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All DBs
Position
1:1527632..1529185
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AA seq
517 aa
AA seq
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MTTTIQQADLIESISAALQYISYYHPADYIAHLARAYEREQSPAAKDAIAQILTNSKMSA
TGQRPICQDTGIVNVFLKVGMDVRWGGFTGSLDDAINEGVRRGYNHPDNTLRASVVADPQ
FDRKNTKDNTPAVIFTEIVPGDKLEVTVAAKGGGSENKSKLVMLNPGDSVVDWVLKTVPT
MGAGWCPPGMLGIGIGGTAEKAALMAKESLMDDLDMHELLAKKNSGAELSKVEALRVELY
EKVNALGIGAQGLGGLATVLDVKIQMYPTHAASKPVAMIPNCAATRHAHFTMDGSGPVYL
EAPSLDLWPDVNWAPDEKKSKRVDLDKLTPAEVASWKPGDTLLLNGKMLTGRDAAHKRIQ
GMLAKGEKLPVDFTNRVIYYVGPVDPVGDEAVGPAGPTTATRMDGFTEMMLAQTGLIAMI
GKAERGPVAIEAIKKHKSAYLMAVGGAAYLVSKAIKTAKVVGFEDLGMEAIYEFDVVDMP
VTVAVDAGGTSAHITGPAEWQKRIASGEFKTIMMEEA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacgatccagcaggccgacctgatcgaatcgatcagcgccgcgctgcagtac
atcagctactaccaccccgccgactacatcgcccacctggcccgcgcctacgagcgcgag
cagagccccgcggccaaggacgccatcgcgcagatcctgaccaacagcaagatgagcgcc
acgggccagcgcccgatctgccaggacaccggcatcgtcaacgtgttcctcaaggtgggc
atggacgtacgctggggcggcttcaccggcagcctcgacgacgccatcaacgaaggcgtg
cgccgcggctacaaccaccccgacaacacgctgcgcgcctcggtcgtggccgatccgcag
ttcgaccgcaagaacaccaaggacaacacgcccgcggtgatcttcacggagatcgttccg
ggcgacaagctcgaggtcaccgtcgcggccaagggcggcggcagcgagaacaagagcaag
ctggtaatgctgaaccccggcgacagcgtggtcgactgggtgctcaagaccgtgcccacc
atgggcgccggctggtgcccgccgggcatgctgggcatcggcatcggtggcaccgccgag
aaagccgccctgatggccaaggaaagcctgatggacgacctcgacatgcacgagctgctg
gccaagaagaactccggcgccgagctcagcaaggtcgaggcgctgcgcgtcgagctctac
gagaaggtcaacgcgctgggcatcggcgcgcagggcctgggcggccttgccaccgtgctc
gacgtcaagatccagatgtaccccacgcacgcggcgagcaagcccgtggcgatgatcccc
aactgcgcggccacccgccacgcgcacttcacgatggacggcagcggccccgtgtacctc
gaggcgccgtcgctcgacctgtggcccgacgtgaactgggcccccgacgagaagaagagc
aagcgcgtcgatctcgacaagctgacgcccgccgaagtggcgagctggaagccgggcgac
acgctgctgctcaacggcaagatgctcaccggccgcgacgccgcgcacaagcgcatccag
ggcatgctggccaagggcgagaagctgccggtggacttcaccaaccgcgtcatctactac
gtcggcccggtcgacccggtgggggacgaggccgtcggccccgccggccccaccaccgcc
acgcgcatggacggcttcaccgagatgatgctggcgcagaccggcctgatcgccatgatc
ggcaaggccgagcgcggcccggtcgccatcgaggccatcaagaagcacaagagcgcctac
ctcatggccgtgggcggcgccgcctacctggtcagcaaggccatcaagaccgccaaggtg
gtcggcttcgaggacctgggcatggaagccatctacgaattcgacgtggtcgacatgccc
gtgacggtggcggtcgacgccggcggcaccagcgcgcacatcaccggcccggccgagtgg
cagaagcgcatcgccagcggcgagttcaagaccatcatgatggaagaagcctga
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