Variovorax sp. PMC12: C4F17_07495
Help
Entry
C4F17_07495 CDS
T05380
Name
(GenBank) RND transporter
Organism
vam
Variovorax sp. PMC12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AVQ80804
UniProt:
A0A2P1V6L2
LinkDB
All DBs
Position
1:1610787..1613897
Genome browser
AA seq
1036 aa
AA seq
DB search
MNVSAWSIRNPIPAVMLFVLLTFGGLLSFNAMKVQNFPDIDLPTVTVSASLPGAAPSQLE
TDVARKLENSIATVQGLKHITTKVQDGAATLIVEFRLEKPVQEAVDDVRSAVQRVRADLP
ADVRDPVVTKLDLAGQPVLAFTIASSQMDNEALSWYVDNDVTKRLLALPGVGAVNRVGGA
TRQVHVDLDPVKLQALGASAGDISRQLRQVQTESAGGRFDLGGSEQPVRTLATVKSADQL
ADMQIVLTDGRRIRLDQVARISDTIAEPRAAALLNGKPVVGFEVARSRGASEVEVGRAVQ
KALADMRAQRPDIELTEAFNFVDPVEEEYNGSLHLLYEGAILAVVVVWLFLRDWRATFVS
AVALPMSVIPAFIGMHLLGFSVNVISLLALSLVVGILVDDAIVEVENIVRHLRMGKTPYQ
AAMEAADEIGLAVIATTFTLIAVFLPTAFMSGVAGKFFKQFGWTAALAVFASLVVARVLT
PMMAAYMLKPVVTAEKEPGWLRWYMRAVEWSTHNRFKTMVLATLFFFGSLAMIPLLKTGF
IPPDDNSQTQVYLSLAPGSTLAQTTAAAEETRRRVMQIAHVKSVYTTVAGGSAGGDPFAS
FGTPETRKATLTIKLDPRGDRPRKQVIENQIRTALETLPGVRSTVGLGGSGEKYILALTG
EDPVALASAASAVEKDLRTVPGLGNITSTASLVRPEIAVRPDFARAADLGVTSSAIAETL
RVATLGDYDQSLAKLNLAQRQVPIVVKLEDSARQDIDLLGRLSVPGTRGPVMLNQVASLT
MEGGPAVIDRYDRSRNVNFEIELSGVGLGDAKAAVQKLPSIQKLPPGVRIAEVGDAEVMT
ELFASFGLAMLTGVLCIYIVLVLLFKDFLHPVTILCALPLALGGAFVGLLIGQKALSMPS
LIGLIMLMGIATKNSILLVEYAIVARRDHGMSRWDALRDACHKRARPIIMTTLAMGAGML
PIAVGFGAADSSFRSPMAMAVIGGLITSTVLSLLVVPAVFTYVDDIEHWIRRTVRKLRGQ
PADPHIDDDLVEAPQR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttccgcctggtccatacgcaacccgattccggcggtgatgctgttcgtgctg
ctcaccttcggtgggttgctgtcgttcaacgcgatgaaggtgcagaacttcccggacatc
gacctgccgaccgtgacggtctcggcctcgctgcccggcgccgcgccttcgcagctggaa
accgacgtcgcgcgcaagctcgagaactccatcgccacggtgcagggcctgaagcacatc
accaccaaggtgcaggacggcgccgccacgctgatcgtcgagttccgcctcgaaaagccc
gtgcaggaagccgtggacgacgtgcgctccgccgtgcagcgcgtgcgcgcggacctgccc
gccgacgtgcgcgacccggtcgtcaccaagctcgacctggcgggccagccggtgctggcc
ttcaccattgcgtcctcgcaaatggacaacgaggcgctgagctggtacgtggacaacgac
gtcaccaagcgtctgctggcgctgccgggcgtgggcgcggtgaaccgcgtgggcggcgcc
acgcgccaggtgcacgtggacctcgacccggtcaagctgcaggcgctcggcgcctcggcg
ggcgacatctcgcgccagctgcgccaggtgcagaccgagagcgcgggcggccgcttcgac
ctgggcggcagcgaacagccggtgcgcaccctggccacggtgaagtcggccgaccagctc
gccgacatgcagattgtgctgaccgacggccgccgcatccggctcgaccaggtggcgcgc
atcagcgacaccatcgccgagccgcgcgcggccgcgctgctcaacggcaagccggtggtg
ggcttcgaagtggcccgcagccgcggtgccagtgaagtggaagtgggccgcgcggtgcag
aaggcgctggccgacatgcgcgcgcagcgccccgacatcgagctgaccgaggccttcaac
ttcgtcgacccggtggaagaggaatacaacggttcgctgcacctgctgtacgaaggcgcc
atcctggcggtggtcgtggtgtggctgttcctgcgcgactggcgcgccactttcgtgtca
gctgtggcgctgccgatgtcggtgatcccggcgttcatcggcatgcacctgctgggcttc
tcggtcaacgtgatctcgctgctggcgctgtcgctggtggtgggcatattggtggacgac
gccatcgtggaagtcgagaacatcgtgcgccacctgcgcatgggcaagacgccctaccag
gcggccatggaggcggccgacgagatcggcctggcggtgatcgccaccaccttcacgctg
atcgcggtgttcctgcccacggccttcatgagcggtgttgcgggcaagttcttcaagcag
ttcggctggaccgcggcgctcgcggtgttcgcctcgctggtcgtggcgcgggtgctcacg
ccgatgatggcggcctacatgctcaagcccgtggtcacggccgagaaggaaccgggctgg
ctgcgctggtacatgcgcgccgtggagtggagcacccacaaccgcttcaagacgatggtg
ctggccaccctcttcttcttcggttcgctggcgatgatcccgctgctgaagaccggcttc
attccgccggacgacaactcgcagacgcaggtgtacctgtcgctcgcgccgggctccacg
ctggcgcagaccaccgccgcggcggaggaaacccgccgccgcgtgatgcagatcgcgcac
gtgaagagcgtctacaccacggtggccggcggcagcgcgggcggcgacccgttcgccagc
ttcggcacgcccgagacgcgcaaggccacgctcaccatcaagctcgacccgcgcggcgac
cggccgcgcaagcaggtcatcgagaaccagatccgcaccgcgctcgaaacgctgcccggc
gtgcgcagcacggtgggcctgggcggctcgggcgagaaatacatcctggcgctgaccggc
gaagacccggtggccctggccagcgcggcgagcgcggtcgagaaagacctgcgcaccgtt
cccggcctgggcaacatcacctccaccgcgagcctggtgcgccccgagatcgcggtgcgc
cccgacttcgcgcgcgccgccgacctgggcgtgaccagttccgccatcgccgagaccctg
cgcgtggccacgctgggcgactacgaccagtcgctcgccaagctcaacctcgcgcagcgg
caggtgccgatcgtggtgaagctggaagactccgcgcggcaggacatcgacctgctcggc
cgcctctcggtgcccggcacgcgcggcccggtcatgctcaaccaggtggcctcgctcacc
atggaaggcggcccggccgtcatcgaccgctacgaccgctcgcgcaacgtgaacttcgag
atcgaactgtcgggcgtgggcctgggcgacgcgaaggccgcggtgcagaagctgccgtcg
atccagaagctgccgccgggcgtgcgcatcgccgaggtcggcgacgccgaggtcatgacc
gagctgttcgcgagcttcggcctggcgatgctgacgggcgtgctgtgcatctacatcgtg
ctggtgctgctgttcaaggacttcctgcacccggtgaccatcctgtgcgcgctgccgctg
gcgctgggcggggccttcgtggggctgctgatcgggcagaaggcgctgtcgatgccttcg
ctgatcggtctcatcatgctgatgggcatcgcgaccaagaactcgatcctgctggtcgaa
tacgccatcgtggcgcgccgcgaccacggcatgagccgctgggacgcgctgcgcgacgcc
tgccacaagcgcgcgcggcccatcatcatgaccacgctcgccatgggcgccggcatgctg
ccgatcgcggtcggcttcggcgcggcggactcgagcttccgctcgccgatggcgatggcg
gtgatcggcgggctgatcacctcgaccgtgctgagcctgctggtggtgccggcggtgttc
acctacgtggacgacatcgagcactggatccgccgcacggtgcgcaagctgcgcgggcag
ccggcggatccgcatatcgacgacgatctggtggaagcgccccagcgctga
DBGET
integrated database retrieval system
