Variovorax sp. PMC12: C4F17_09975
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Entry
C4F17_09975 CDS
T05380
Name
(GenBank) keto-deoxy-phosphogluconate aldolase
KO
K01625
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:
4.1.2.14
4.1.3.42
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00030
Pentose phosphate pathway
vam00630
Glyoxylate and dicarboxylate metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
C4F17_09975
00630 Glyoxylate and dicarboxylate metabolism
C4F17_09975
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.14 2-dehydro-3-deoxy-phosphogluconate aldolase
C4F17_09975
4.1.3 Oxo-acid-lyases
4.1.3.42 (4S)-4-hydroxy-2-oxoglutarate aldolase
C4F17_09975
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Gene cluster
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Motif
Pfam:
Aldolase
Motif
Other DBs
NCBI-ProteinID:
AVQ81247
UniProt:
A0A2P1V7T1
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Position
1:complement(2129053..2129688)
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AA seq
211 aa
AA seq
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MTDKLTPLDVMRDAPVIPVIVLNDVKDAIPLARALVAGGIRMLEVTLRTPQALQCIEAIA
REVPEAVAGAGTIRSAADAQASALAGAKFGVSPGYTRSVGKACHDLGLPLLPGVATGSEI
MTAQEDGYTQLKFFPALQAGGLPMLKAWQGPFGDVTFCPTGGIHAGNAAEFLALSNVACV
GGSWIVPTDAIRDGDWARIEQLARAASQLPR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaactcacccctctcgacgtgatgcgtgacgcacccgtcattccggtcatc
gtgctgaacgacgtgaaagacgcgattccgctcgcgcgcgctctggtggccggcggcatc
cgcatgctcgaggtcacgctgcgcacgccgcaggcgctgcagtgcatcgaggccatcgcc
agggaagtgcccgaggccgtggccggcgcgggcaccatccgcagcgcggccgacgcacag
gcgtcggcgctggccggggcaaagttcggcgtgagcccgggctacacgcgctccgtcggc
aaggcctgccacgacctcggcctgccgctcctgcccggcgtggccaccggcagcgagatc
atgaccgcgcaggaagacggctacacccagctgaagttcttccccgcgctgcaggcgggc
ggcctgccgatgctgaaggcctggcaaggcccgttcggcgacgtcaccttctgccccacg
ggcggcatccacgcgggcaacgcggcggagttccttgcgctgtcgaacgtggcctgcgtg
ggcggttcgtggatcgtgccgaccgacgccatccgcgacggcgactgggcccgcatcgag
cagctggcacgcgccgcgagccagctgccgcgctga
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