KEGG   Variovorax sp. PMC12: C4F17_15965
Entry
C4F17_15965       CDS       T05380                                 
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
  KO
K11902  type VI secretion system protein ImpA
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_15965 (tssA)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_15965 (tssA)
SSDB
Motif
Pfam: ImpA_N
Other DBs
NCBI-ProteinID: AVQ82324
UniProt: A0A2P1VAX1
LinkDB
Position
1:3434179..3435219
AA seq 346 aa
MLNNQLAAALLTPIGEASPCGDDLEYDADFTALVSAAQGKPEQQFGDTVIPAVEPEWREV
AEQSDAILRRSKDLRAAVLLLRAATRLQGVAGFAAGLRLLTDLLDSFWDGIHPKLDADDD
NDPTMRLNALAPLTDEGMGLRDLYDAQVGIARGVGPIRVRDIAIAHNALTAVGGEAAYSM
AQVQGGLEAIQAERPEAIQAAVEVPALIDRLHRLIVDRTGRADAVDFDALRGIGRVLNKA
CAAASGAPADAAGAATGEGDAGTQDASAAAAHPAAPRGEIQNRQDAVQMLDRVIRYLEQA
EPGNPAPLLIERAKKLIGVSFLEIMANLAPNAMDTIETVTGRRPSE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgctgaacaaccaacttgccgccgcactgctcacgcccatcggcgaagcatcgccgtgc
ggcgacgacctggagtacgacgcggacttcaccgcgctcgtctcggccgcgcaaggcaag
ccggagcagcagttcggcgacacggtcattcccgcggtcgagcccgagtggcgcgaagtc
gccgagcagtccgacgccatccttcgccgcagcaaggacttgcgcgccgcggtgctgctg
ctgcgcgccgccacgcgcctgcagggcgttgccggtttcgccgcggggctgcgcctgctg
accgacctgctcgacagtttctgggacggcatacatccaaagctcgatgcggacgacgac
aacgatccgacgatgcgcctgaacgcgctcgcgccgttgaccgacgaaggcatgggcctg
cgcgacctgtacgacgcgcaggtcggcatcgcgcgcggcgtcgggccgatccgcgtgcgc
gacatcgccattgcgcacaacgcgctcaccgccgtcggcggcgaggcggcgtattccatg
gcgcaggtgcagggcgggctcgaagccatacaggccgagcggcccgaggccatacaggct
gccgtcgaggtgcccgcgctgatcgatcgcctgcacaggctcatcgtcgatcgcaccggt
cgtgccgacgcggtcgacttcgacgcgctgcgcggcatcggccgcgtgctgaacaaggcc
tgcgccgcggccagcggcgcgccggcggatgccgcgggcgcggcaaccggcgagggcgat
gcgggcacgcaggacgcaagcgccgcggccgcacatcccgcagccccgcgcggcgagatc
cagaaccgccaggacgcggtgcagatgctcgaccgggtgatccgctacctcgagcaggcc
gagcccggcaaccccgcgccgctgctgatcgagcgcgcgaagaagctcatcggcgtgagc
ttcctcgagatcatggccaacctcgcgcccaacgcgatggacaccatcgagacggtcacg
ggccgacgcccttccgaataa

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