KEGG   Variovorax sp. PMC12: C4F17_16135
Entry
C4F17_16135       CDS       T05380                                 
Symbol
tssL
Name
(GenBank) type VI secretion system protein TssL
  KO
K11892  type VI secretion system protein ImpK
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_16135 (tssL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_16135 (tssL)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_16135 (tssL)
SSDB
Motif
Pfam: DotU OmpA DEC-1_N
Other DBs
NCBI-ProteinID: AVQ82357
UniProt: A0A2P1VB25
LinkDB
Position
1:complement(3478224..3479573)
AA seq 449 aa
MSTPPDPFAAFESERTVIKPKPRTPGGAPPAPAPAPFFGGADPTPAAEVGELGLLNPLVS
AAGKLLVLIGKLRNLAQPPNVPALRASTADAVNQFDANARRAGVSNESVLAARYVLCTAL
DEAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVLA
LGFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPAVEPELSPHWRGQGAGTVRLRESLPLW
VFAAGFALLLALAWFALRLTLNYRSDTTYAAVSSLRAPNIQIAPPALPAKTPRLARFLEP
EIKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAQSLPVLRRIGQALAEVKGEVLITGH
SDNQPIRSLRYPSNWHLSAARADAVKGALSTLVEPARMRSDGKADAEPVAANDTPANRAR
NRRVDIVLLTEPDRLAAATSAAPVPGATK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagcacacctcccgatccttttgccgctttcgaatccgaacgcacggtcatcaagccc
aagccgcgcacgccgggcggtgcgccgcctgcgcctgcaccggcgccgttcttcggcggc
gccgatccgacgcccgcggccgaggtcggcgaactggggttgctcaacccgctggtgtcg
gccgccggcaagctgctggtgctgataggcaagctgcgcaacctggcgcagccgcccaac
gtgccggccctgcgcgcgtccaccgcggacgcggtgaaccagttcgacgccaacgcgcgc
cgcgccggcgtgagcaacgaatcggtgctcgccgcgcgctacgtgctgtgcaccgcgctc
gacgaagcggtggccaacacgccctggggcgtgcaggctggctggaacaagcagagcctg
ctggtgcagttccacaacgagacctggggcggcgagaaggtgttccagctgctggccaag
ctcgcgcaggacgtgcccacgcaccgccagttgctggagctgatctacagcgtgctcgcg
ctcggcttcgagggccgctaccgcgtggtcgacaacggccgcgcgcagctcgactcggtg
cgccagcgcctggccgacctgatcgccaaggaccgccccgccgtggagcccgagctttct
ccgcactggcgcgggcagggcgcgggcactgtgcggctgcgcgagtcgctgccgctgtgg
gtgttcgcggccggcttcgcgctgctgctggcgctcgcgtggttcgcgctgcggctcacg
ctcaactaccgctccgacaccacctatgcggcagtctccagcctgcgcgcgcccaacatc
cagatcgcgccgccggccctgccggcgaagacgccgcgcctcgcgcgcttcctggagccc
gagatcaagcagggcctggtcaccgtgaccgacgaagccgaccgcagcgtggtgcgcctg
cgcggcgattccttcttcggttccggcagcgccgagccgatggcgcagtcgctgccggtg
ctgcgccgcatcgggcaggcgctggccgaggtgaagggcgaggtgctgatcaccggccac
tccgacaaccagccgatccgctcgctgcgctatccgtccaactggcatctgtcggccgcg
cgtgccgacgcggtgaagggcgcgctgagcacgctggtcgagcccgcgcgcatgcgctcg
gacggcaaggccgatgccgagcccgtggccgccaacgacacgcccgccaaccgtgcgcgc
aaccgccgcgtcgacatcgtgctgctgaccgaacccgaccggctcgccgccgccacatcg
gctgctcccgttccaggagcgacgaaatga

DBGET integrated database retrieval system