Variovorax sp. PMC12: C4F17_16805
Help
Entry
C4F17_16805 CDS
T05380
Name
(GenBank) hypothetical protein
Organism
vam
Variovorax sp. PMC12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DMFA2_C
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
AVQ84669
UniProt:
A0A2P1VHK9
LinkDB
All DBs
Position
1:complement(3633147..3635474)
Genome browser
AA seq
775 aa
AA seq
DB search
MPQPIPPHRALQVPGVHGYTDRKSVAAGEVVRFHLSSDVPYALSVCRLGPDVEGRTADTV
LHAFAPSAARVHPIHPGSYVQVARGLDQPLRALTLECWVQPWSIGTRQSVVGQYDLPGAC
GYGLFIDEAGRAVFYLGDGGAFRAQGQLAGGALRAKRWHHLVATWDGEQTVLWIDGEAVA
RGRWTGPMQPGRAPLRLGGSGIDGLADAFLEGDIVMPAIYSHALQPAEVRARFADRGLHT
PRGRTVLACWPLREERGDTVADASGHQRTGRIVNHGTWMIVGPAFEPQRVNEFSDDGYDP
LADPTRGHGLRLASDDLYDCRWPESHALRIPPDAKSGVYVGRVRYLLDGEPAEYDIAFIV
RRAAHRAPAPVLVLCATNSWLAYASTPFAKNTAGDPVWPRRSAGLENSHPEAPAYCSYTY
HRGGQPTYQVGLRMPWPNASPNALYDPADAGFSQWTRLERRLHVWLDQAGYDYDVVSDLD
LHRDPGLLKAYKTVIVNGHSEYWSLPACDGLDDYLCGGGTAIVLSGNTMYLRVSYNEEGT
VMEQRKVLGANDLDSEEAAKVRPPAGPYGEQYHSQDWARGGHFRQAGRSCAEIIGLESAG
WAFADGGDFGVYHATQPRHFLFTQPNALGLTQGATFGHAPGGGLPRAIGHEWDLSVATLC
RMTHALPAGQQLPEPQRGIEVIAQGRRHRPGRLDAYLDYFSNVTESLDGLSAEMIYWERP
RGGRVFNAGAVGASWVLGVDPCFEGVLRNVLHHFGVRPATGADLAVQPSLEHEAP
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacccattccgccgcaccgcgcgctgcaagtgcccggcgtgcatggctacacc
gaccgcaagagcgtggccgccggcgaggtggtgcgctttcacctgagcagcgacgtgccc
tatgcgctttcggtgtgccgcctcggccccgatgtcgaaggccgcacggccgacaccgtg
ctgcatgccttcgcgccttccgccgcgcgcgtgcatccgatccaccccggctcctacgtg
caggtggcgcgcgggctcgaccagccgctgcgcgcgctcacgctggagtgctgggtgcag
ccttggagcatcggcacgcgccagagcgtcgtcgggcaatacgacctgccgggcgcctgc
ggctacggccttttcatcgacgaggccgggcgcgcggtgttctacctgggcgacggcggc
gcgttccgtgcgcagggccagctcgcgggcggcgcgctgcgggccaagcgctggcaccac
ctcgtcgccacatgggacggcgagcagacggtgctgtggatcgacggcgaagcggtcgcg
cggggccggtggaccggcccgatgcagccgggccgcgcgccgctgcgcttgggcggcagc
ggcatcgacggcctggcggatgcgttcctggagggcgatatcgtcatgcccgcgatctat
tcgcatgcgctgcagccggccgaggtgcgcgcgcgtttcgcggaccgcggcctgcacacg
ccgcgcggtcgcacggtgctggcctgctggccgctgcgcgaggagcgcggcgacaccgtg
gccgacgccagcggccaccagcgcaccggacgcatcgtcaaccacggcacctggatgatc
gtcggcccggccttcgagccacagcgggtgaacgagttctccgacgacggctacgacccg
ctggccgaccccacgcgcggccacggcctgcggctggcgagcgacgacctgtacgactgc
cgctggcccgagagccatgccttgcgcattccgccggatgcgaagtcaggcgtgtacgtg
ggccgcgtgcgctacctgctggacggcgagcccgccgaatacgacatcgccttcatcgtg
cgccgcgccgcgcaccgggctcccgcgccggtgctggtgctttgcgccaccaacagctgg
ctggcctatgccagcacgcccttcgcgaagaacacggccggcgatcccgtgtggccgcgg
cgttcggcgggcctggagaacagccatcccgaggccccggcctactgcagctacacctac
caccgcggcggccagccgacctaccaggtgggcctgcgcatgccctggcccaatgccagc
cccaacgcgctgtacgaccccgccgatgcgggcttcagccagtggacccggctggagcgc
cggctgcatgtgtggctggaccaggccggctacgactacgacgtggtgagcgacctcgac
ctgcaccgcgacccgggcctgctgaaggcctacaagaccgtgatcgtcaacggccacagc
gagtactggtcgctgccggcctgcgacgggctcgacgactacctgtgcggcggcggcacg
gccatcgttctgtcgggcaacaccatgtacctgcgcgtgagctacaacgaagagggcacg
gtgatggagcagcgcaaggtgctcggcgcgaacgacctggacagcgaggaggccgcgaag
gtgcgcccgcccgccggcccctacggcgagcagtaccactcgcaggactgggcgcgcggc
ggccatttcaggcaggccgggcgctcgtgcgccgagatcatcgggctcgagtcggcgggc
tgggcctttgccgacggcggcgatttcggcgtgtaccacgccacgcagccgcggcacttc
ctgttcacgcagccgaatgcgctgggcctgacccagggcgcgaccttcggccatgcgccg
ggcggcggcctgccgcgcgccatcggccacgagtgggacctgagcgtggcgacgctgtgc
cgcatgacgcacgcgctgccggccggccagcagttgcccgagccgcagcgcggcatcgag
gtcatcgcgcaggggcgccgccaccggccgggccggctcgacgcgtatctcgactacttc
tccaacgtgaccgagtcgctcgacggactctcggccgagatgatctattgggaacgcccc
cggggcggccgcgtgttcaacgccggcgccgtgggcgcgagctgggtgctcggcgtcgat
ccctgtttcgaaggggtgctgcgcaacgtgctgcatcacttcggcgtccggcccgcgacg
ggcgcggaccttgcagttcaaccatccctggagcacgaagcaccatga
DBGET
integrated database retrieval system
