Variovorax sp. PMC12: C4F17_18825
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Entry
C4F17_18825 CDS
T05380
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_18825
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_18825
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
C4F17_18825
Prokaryotic type
C4F17_18825
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C4F17_18825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
DAO
Thi4
HI0933_like
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AVQ82849
UniProt:
A0A2P1VCF4
LinkDB
All DBs
Position
1:complement(4071493..4073439)
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AA seq
648 aa
AA seq
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MLYPEEFDVIVVGGGHAGTEAALAAARMGAKTLLLSHNIETLGQMSCNPSIGGIGKGHLV
KEVDALGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLSL
FQQAVDDLMVEGDRVVGAVTQVGIAFRARTVVLTAGTFLDGRIHVGLDNYQAGRAGDPPA
VSLSARLKELKLPQGRLKTGTPPRLDGRSIDFSKCTEQPGDGMPGGAGPMPVFSFMGRTD
MHPRQMPCWITHTNARTHDIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQ
IFLEPEGLTTNEYYPNGISTSLPFDIQYQLVRSMPGLENAHILRPGYAIEYDYFDPRELK
SSFETRSVKGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGEDAWLPRRDEAYLGVLV
DDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTETGRKLGLVDDARWDAFSRKRDAVS
RETERLKSIWVNPRNLPASESERVLGKAIDHEYNLADLLRRPDVNYETLMSLDGSKYAAP
VALSETEIEQIEISAKYSGYIERQHDEVERAAHFENLKLPADFDYGQVKALSFEVRQKLD
KHRPETLGLASRISGVTPAAISLLMIHLRKGGHKAFARDTATTEAAAE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctgtaccccgaagaattcgacgtgatcgtcgtcggcggtggccacgccggcaccgaa
gccgcgctcgccgccgcgcgcatgggcgccaagacgctgctgctctcccacaacatcgag
acgcttgggcagatgagctgcaacccgtcgatcggcggcatcgggaagggccacctggtg
aaagaggtcgatgcgctcggcggcgcgatggcgattgccaccgacgaagccggcatccag
ttccgcattctcaattcgagcaagggcccggccgtgcgtgcgacgcgtgcgcaggccgac
cgcgtgctctacaaggcggccattcgccatcgcctggagaaccagccaaacctgagcctg
ttccagcaggcggtcgacgacctgatggtggagggcgatcgcgtggtgggcgccgtcacc
caggtgggcattgctttccgtgcgcgcacggtggtgctcactgctgggactttcctcgac
ggccgcattcacgtcggcctcgacaactatcaggccggtcgcgcgggcgatccgccggcg
gtgagcttgtcggcgcggctcaaggaactgaagctgccgcagggccgcctcaagacgggc
acgccgccgcggctcgacggccgcagcatcgatttctcgaagtgcaccgagcagccgggc
gacggcatgccgggtggggcagggccgatgccggtgttcagcttcatgggccgtacggac
atgcatccgcggcagatgccttgctggatcacccataccaacgcgcgcacgcacgacatc
atccgctctggcttcgaccgcagcccgatgttcaccggcaagatcgacggcgtgggcccg
cgctattgcccgagcgtggaagacaagatcaatcgcttcgccgacaaggaaagccaccag
atcttcctggagcccgaaggcctgacgaccaacgagtactacccgaacgggatctcgacc
agcctgcctttcgacatccagtaccagctggtgcgctcgatgcccggcctggaaaacgcg
cacatcctgcggccgggctacgccatcgagtacgactacttcgatccgcgcgagctcaag
agcagcttcgagacccgttcggtcaagggcctgttctttgcagggcagatcaacggcacg
accggctacgaagaggcggcggcccagggcctgtttgccggcatcaacgctgcgctgcaa
tgccggggcgaagatgcctggctgccgcgccgtgatgaagcctatttgggcgtgctggtc
gatgacctgatcacgaagggcgtgaccgagccctaccgcatgttcaccagccgtgccgag
ttccggctgcagcttcgcgaagacaacgccgacatgcgcctgaccgaaaccggccgcaag
ttgggcttggtggacgatgcacgctgggatgctttcagccgcaagcgcgatgctgtttca
cgtgaaacagagcggctcaagtcgatctgggtgaatccgcgaaacctgcctgcctccgag
tcggagcgcgtgctgggcaaggccatcgaccatgaatacaacctggccgatctgctgcgc
cgccctgatgtgaactacgagacgctgatgtcgctggacggtagcaagtacgccgccccg
gtggcgctgagcgaaaccgagatcgagcagatcgaaatttcggccaagtactccggctac
atcgagcgccagcacgacgaagtggagcgtgccgcgcatttcgaaaatctcaagttgccg
gccgacttcgactatgggcaggtcaaggcgctgagcttcgaagtgcggcagaagctcgac
aagcaccgcccggagacgctgggactggcctcgcgcatctccggcgtgacgcccgctgcg
atctcgctcttgatgatccatctgcgcaagggcggccataaagcctttgcccgtgataca
gccaccacggaagctgccgccgaatga
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