Variovorax sp. PMC12: C4F17_24440
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Entry
C4F17_24440 CDS
T05380
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_24440
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_24440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
STN
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVQ83847
UniProt:
A0A2P1VF99
LinkDB
All DBs
Position
1:complement(5217070..5219604)
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AA seq
844 aa
AA seq
DB search
MTRIEQAASLPSKKKKQQKKNRPAGLPAAIRHWVIGGTCALMTGLPAMAQAQPQVQAQQV
FDVGAGDLKAALDAYIAQGGVQLLYKVDDVKGMVTRGVKGALPPQEALSRILEGTPLLTR
RGDDGAIVIYTAAPVVAKPTTDEPQSLDSVTVTATRRREPVREVPMQVNVMKAETLERAG
AKNLADYVAEQPGVNMTSSGSVGGILTMRGLTTGPVQGIATVGVYVDDVATGLSSSGALA
GFTPLDMGMLDLNHIEVLRGPQGTLYGAGAMSGVLKYVTNQPDTMEFAGSVKFGTSWTQG
GGPGFTTGAVLNVPLKEDVAAVRFAAFTDQLGGSYDASGPARGRNIDRGHTDGGRVSVLL
TPTRELTVRLTGTVQDVKRQGLGFEDIDRRTLRPWGLDRTRQLSSREPYTNKTQLFGLDV
EYDFGWARLNSITSAQDVKITNSVDLTALYAPALAALRLSAASAPLASAVEQHRVSQEFR
LTSRSGTTIEWLAGIYLNRERGANDGTLSANLNGGLGSKTFLASTQSSRYREEAFYGDVT
WNATPALSFTGGMRLARNNQRYASRQSGTLVGPVDANASGTSSESPTTYLAAAKYTLSET
SNVYFRAASGYRPGGPNVLKADTDRRIVQPMYKSDSLWSYELGYKADLLDRKLSLEAALY
DIEWRDVQQPTRSGGFVFVTNAGGARVKGGELTLAWKPSKEWRFTANAALIDARLTEDAK
GLDAKAGTRLPQTPRFATTLGVTRNFSIAEHPAYFGVSARYTGKRDAGYAGSSTIPSIKM
PAYTLVDLQAGIDFQRFSLSAYVRNLTNKRGFLSIDTGLAANPNLVQAALAPSRTVGLAV
NVPF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaatcgagcaagccgcaagcctgccctccaagaagaagaagcagcagaaaaaa
aacaggccggcgggccttccggcggcgatccgccactgggtcatcggcggcacgtgcgca
ctgatgacagggctgcccgcgatggcgcaggcacagccgcaggtccaggcgcagcaggtc
ttcgacgtgggtgccggcgacctgaaggcggcgctcgacgcctacatcgcgcagggcggc
gtgcagctgctctacaaggtcgacgacgtgaagggcatggtcacgcgcggcgtgaagggc
gcgctgccaccgcaggaagcgctgtcgcgcattctcgaaggcacgccgctgctcacgcgc
cgtggcgacgacggcgcgatcgtgatctacaccgccgcgcccgtcgtggcgaagccgacc
accgacgagccccagtcgctcgacagcgtcaccgtcacggccacgcgccgccgcgagccg
gtgcgcgaagtgccgatgcaggtcaacgtgatgaaggccgagacgctggagcgcgccggc
gccaagaacctcgccgattacgtggccgagcagccgggcgtgaacatgacgagcagcggc
agcgtgggcggcatcctgacaatgcgcgggctgaccaccggcccggtgcagggcattgcc
actgtcggcgtgtatgtggacgacgtggccacggggctgagctcgtccggcgcgctcgcc
ggcttcacgccgctggacatgggcatgctcgacctgaaccacatcgaggtgctgcgcggc
ccgcagggcacgctgtacggcgccggcgccatgagcggcgtgctcaagtacgtgaccaac
cagcccgacacgatggagttcgcgggctcggtgaaattcggcacctcgtggacgcagggc
ggcggcccgggcttcacgaccggtgcggtgctcaacgtgccgctgaaggaagacgtggcg
gccgtgcgcttcgccgccttcaccgaccagctcggcggcagctatgacgcgtccggcccg
gcacggggccgcaacatagaccgcggccataccgacggcggccgggtctcggtgctgctg
acgcccaccagggaactcacggtgcgcctgacgggcaccgtgcaggacgtgaagcgccag
ggcctgggcttcgaggacatcgacaggcgcacccttcgcccgtggggcctcgaccgcacg
cgccagctgtcgtcccgcgagccctacaccaacaagacgcagctgttcggcctggacgtg
gagtacgacttcggctgggcgcgcctgaactcgatcacctccgcgcaggacgtgaagatc
accaactccgtcgacctcaccgccctctatgcgccggcgctcgccgcgctgcgcctgtcg
gccgcctcggcgccgctggccagcgccgtggagcagcaccgcgtgagccaggagttccgc
ctgacctcgcgctcggggaccaccatcgagtggctcgccggcatctacctgaaccgcgaa
cgcggcgccaacgacggcaccctcagcgcgaacctcaacggcgggctgggcagcaagacc
ttcctcgcgtcgacgcagtcttcgcgctaccgcgaggaggccttctatggcgacgtcacc
tggaacgcgacgcccgcgctgtcgttcaccggcggcatgcggctggcgcgcaacaaccag
cgctatgcgagcaggcagtccggcacgctggtcgggccggtcgacgccaacgccagcggc
acttcgtcggaaagccccaccacctacctcgccgcggccaagtacacgctgtcggagacc
agcaacgtctacttccgtgcagccagcggctaccgccccggcggcccgaatgtgctgaag
gctgacaccgaccgcaggatcgtgcagccgatgtacaagtcggactcgctgtggagctac
gagctcggctacaaggccgacctgctggaccgcaagctgtcgctggaagccgcgctctac
gacatcgaatggcgcgacgtgcagcagcccaccaggagcggcggcttcgtgttcgtcacc
aacgccggcggcgcacgcgtcaagggcggcgagctcacgctcgcctggaagcccagcaag
gaatggcgcttcaccgccaacgccgcgctcatcgacgcacgcctcaccgaagacgccaag
ggcctggacgccaaggcgggcacccgcctgccccagacaccgcgcttcgcgaccacgctg
ggcgtgacgcgcaacttcagcattgccgagcaccccgcctacttcggcgtcagcgcacgc
tacaccggcaagcgcgacgcgggctacgccggcagctcgaccattccgagcatcaagatg
ccggcctacacgctggtcgacctgcaggcgggcatcgacttccagcgcttcagcctctcg
gcctatgtgcgcaacctgacgaacaagcgcggcttcctgtcgatcgacaccggcctggcg
gcgaacccgaacctggtgcaggcggcactggcgccttcacgcaccgtcggcctggccgtc
aacgttcccttctga
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