Vibrio anguillarum 775: VAA_02358
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Entry
VAA_02358 CDS
T01536
Name
(GenBank) Transcriptional regulator, LysR family
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
van
Vibrio anguillarum 775
Pathway
van05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
van00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA_02358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
van03000
]
VAA_02358
Transcription factors [BR:
van03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAA_02358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEH33614
LinkDB
All DBs
Position
I:2184511..2185542
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AA seq
343 aa
AA seq
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MFHFVTRLHTIYMGYVWIVRNVTFVKQVDMTQDLTNDIRINYSNSKNNVSGTMKLDDLNL
FRLVVENGSYTATSRKTMIPVATITRRIQALEDSLNLRLLNRHARKLSLTEAGERFFQEC
SPLLHRLAATAEELTDECRGASGKLRISSPSNVTKRMMMPIFNAFMMQYPDINIELTTSN
QADQLDPTEWDVIFRVGPQRDSSLIARKINEVKDVLVASPGYLAKHPAPTHAEELSNHSL
LKGYPLVKWQLTNNKGECVVNCDTGRFQANALNVVRSACSEGLGITLMPDVMIKEFIEEG
SLVRVLEDWVSNPRDIYMLYNHKDHLPEKVRLFIDFVIAYHIH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttccactttgtaactcggttgcatactatatatatgggctatgtatggattgtacgg
aatgttactttcgtcaaacaagttgatatgactcaagatttgacaaatgatatacgtata
aattactcaaattcgaaaaataatgtgtcaggaacaatgaaattagatgacctaaacctc
tttcgactggttgtcgaaaatggaagctataccgcaacttctcgtaaaacaatgatcccc
gttgcgaccattacccgacgcattcaagcattggaagattctctgaatcttaggttgttg
aatcgccatgctcgaaaactttcgctgactgaagcgggtgaacgtttttttcaagagtgc
tcaccgttgctgcatcgcttagctgcaacagcagaagagctcaccgatgaatgtcgtggc
gcttcaggcaaactaagaatatcgtcaccatctaatgtcacgaaacgcatgatgatgcct
atcttcaatgccttcatgatgcagtacccagatatcaacatagaactgaccaccagcaat
caggccgatcaactcgacccaaccgaatgggatgtcatttttagagttggccctcaacga
gactccagtttgattgcgcgaaaaattaatgaagtgaaagatgtgttagtcgcaagccca
gggtatttagcgaaacaccctgcaccaactcatgccgaagagctcagtaatcattcatta
ttgaagggatatcctctagtaaaatggcagctgaccaacaataaaggggaatgcgtggtc
aattgtgatactggtcgttttcaggccaacgctttaaacgtagtgcgcagcgcttgctct
gaggggctgggtatcaccttaatgccagacgtgatgattaaagaatttatcgaagaaggc
agcttagtcagagtactggaagactgggtttccaaccctcgtgatatttatatgctgtac
aaccacaaggatcatctacctgaaaaagtcaggctatttattgattttgtgattgcctat
cacatccactag
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