KEGG   Variovorax paradoxus S110: Vapar_0424
Entry
Vapar_0424        CDS       T00916                                 
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03030  DNA replication
vap03430  Mismatch repair
vap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Vapar_0424
   03430 Mismatch repair
    Vapar_0424
   03440 Homologous recombination
    Vapar_0424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vap03032]
    Vapar_0424
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_0424
Enzymes [BR:vap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Vapar_0424
DNA replication proteins [BR:vap03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Vapar_0424
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Vapar_0424
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: ACS17087
UniProt: C5CJ87
LinkDB
Position
1:462199..463284
AA seq 361 aa
MQLASAQLGSHLQKGLKSLYAIHGDEPLLAQEAADAIRTAARAAGYTERSSYTVAGAHFD
WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSIALQQLAESAQGNDSTLTLVMLPRLD
KATRTGAWFSALENNGVSLQVDPIERNALPQWIAQRLGLQGQRVMPGDEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELSWEQVEGAVNNVARYDVFKLSEAVLAGNPQRVARML
DGLQAEGEAEVLVHYTIAEDIRALKRVKDAMAAGRPLPMALRENRIWGPRERAFERVLPR
LDDRMLARLLRAAHVVDGICKGLKQPDWPAGGWQALQRLALMLCRACSTGPAPSPSGRGL
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcagcttgccagtgcccagctgggctcccatctgcagaaggggctgaagtccctctac
gcgatccatggcgacgagccgctgctcgcgcaggaggcggccgatgccatccgcaccgcg
gcgcgcgcggcgggctatacggagcgcagctcctacaccgtggccggtgcgcacttcgac
tggagcgcggtgctggcggcgggcggttcgctctcgctgttcgccgacaagcagatcgtc
gagatccgcattccctcgggcaagcccggcaaggacggcagcatcgcgctgcagcagctg
gccgagtccgcgcagggcaacgacagcacgctcacgctggtgatgctgccgcggctggac
aaggccacgcgcaccggcgcgtggttctcggcgctcgagaacaacggcgtgagcctgcag
gtcgacccgatcgagcgcaacgcgctgccgcagtggatcgcgcagcgcctgggcctgcag
ggccaacgcgtgatgcccggcgacgaaggccagcgcacgctgcagttctttgccgaccgc
gtggaaggcaacctgctggccgcccaccaggagatccagaagctcgccctgctgcatccg
gccggcgagctgagctgggagcaggtcgagggcgcggtcaacaacgtggcgcgctacgac
gtcttcaagctctccgaggccgtgctggccggcaacccgcagcgcgtggcgcgcatgctc
gacggcctgcaggccgaaggcgaggccgaggtgctggtgcactacacgatcgccgaggac
atccgcgcgctcaagcgcgtgaaggacgccatggccgcgggccggccgctgccgatggcg
ctgcgcgagaaccgcatctggggcccgcgcgagcgcgccttcgagcgcgtgctgccccgg
ctggacgaccgcatgctggcccgcctgctgcgcgcggcccatgtggtggacggcatctgc
aaggggctcaagcagcccgactggcccgccggcggctggcaggcgctgcagcggctggcg
ctgatgctgtgccgcgcctgcagcaccggtcccgctccctctccctccgggagagggttg
ggatga

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