Variovorax paradoxus S110: Vapar_0712
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Entry
Vapar_0712 CDS
T00916
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vap03032
]
Vapar_0712
03036 Chromosome and associated proteins [BR:
vap03036
]
Vapar_0712
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_0712
DNA replication proteins [BR:
vap03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Vapar_0712
Chromosome and associated proteins [BR:
vap03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Vapar_0712
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Vapar_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACS17366
UniProt:
C5CLH1
LinkDB
All DBs
Position
1:776084..776461
Genome browser
AA seq
125 aa
AA seq
DB search
MNRIELVEKIATAHNVSKAEAARILETVTGSIVAAVKKGDPVQLIGFGTFKQVARAARTG
FNPQAGAKIKIAAQKVPKFVPGAAFKAAIDPKAAKRKADKAAAAKPAKKAAPAKKAAPAK
KAAKK
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgtatcgaactggtcgagaagatcgccaccgcccacaacgtcagcaaggccgaa
gccgcccgcatcctggaaaccgtcacgggttccatcgtcgccgcagtgaagaagggcgac
cccgtgcagctcatcggcttcggaaccttcaagcaagtggcgcgcgccgcacgcaccggc
ttcaacccgcaagccggcgccaagatcaagatcgccgcgcagaaggtgcccaagttcgtg
ccgggcgctgcgttcaaggccgccatcgaccccaaggctgcaaagcgcaaggccgacaag
gccgcggcagccaagcccgccaagaaggcagcaccggccaagaaggccgcacccgccaag
aaggctgccaagaagtaa
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