Variovorax paradoxus S110: Vapar_0921
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Entry
Vapar_0921 CDS
T00916
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00470
D-Amino acid metabolism
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
vap01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Vapar_0921
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_0921
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Vapar_0921
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_0921
Enzymes [BR:
vap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Vapar_0921
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Precursor biosynthesis
Amino acid ligase
Vapar_0921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
GARS_A
ATP-grasp
CPSase_L_D2
TTL
Motif
Other DBs
NCBI-ProteinID:
ACS17572
UniProt:
C5CNF6
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All DBs
Position
1:1015122..1016093
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AA seq
323 aa
AA seq
DB search
MSLQDPKQFGKVAVLFGGSSAEREISLLSGNGVLEALRSRGVDAHAFDPAERDLVELRRE
GFARCFIALHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPR
YVRLAFDQQSREQVRAVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAVTLSARYDAD
VLCEEFIEGEEVTCAVLGQGLDARALPVVRIAAPEGAYDYQNKYFTDDVKYHCPSGLPEA
EEHEIQRITLAAYHTLGCRGWGRADVMIRASDRKPFLLEMNTSPGMTSHSLVPMSARASG
IAYEDLCLRVLASASLDAAGGAQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcaggatcccaagcaattcggcaaggtggccgtgctgttcggcggaagctct
gccgagcgcgaaatctcgctcctgtccggcaacggcgtgctcgaggcgctgcgctcgcgc
ggcgtcgatgcgcatgccttcgatcccgccgagcgcgacctggtcgagctgcggcgcgag
ggcttcgcgcgctgcttcatcgcgctgcatggccggcatggcgaggacggcacggtgcag
ggcgcgctcgagctgctcggcattccctacaccggctcgggcgtgatggcttcgagcgtg
gccatggacaaggtcatgaccaagcgcatctggcaggccgacggcctgccgacgccccgg
tacgtgcgcctggcgttcgatcagcaaagccgcgagcaggtccgcgccgtgcccgacgtg
ctgggcctgccgctgatcgtgaagccgccgcgcgagggctcgtcgatcggcgtgaccaag
gtcgagggctattcgcagatgcaggacgcggtgacgctgtcggccaggtacgacgccgac
gtgctgtgcgaggaattcatcgagggcgaggaagtgacctgcgccgtgctcggccagggg
ctcgacgcgcgcgcgctgccggtggtgcgcattgccgcacccgaaggcgcctacgactac
cagaacaagtacttcaccgacgacgtgaagtaccactgcccgagcgggctgcccgaagcc
gaggagcacgagatccagcgcatcacgctggccgcgtaccacacgctcggctgccgcggc
tggggccgcgccgacgtgatgatccgcgcgagcgaccgcaagcccttcctgctcgagatg
aacacctcgcccggcatgaccagccattcgctggtgcccatgtcggcgcgcgcatcgggc
attgcctacgaagacctgtgcctgcgcgtgctggcctcggcttcgctggatgccgcaggg
ggagcgcaataa
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