KEGG   Variovorax paradoxus S110: Vapar_0921
Entry
Vapar_0921        CDS       T00916                                 
Name
(GenBank) D-alanine/D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00470  D-Amino acid metabolism
vap00550  Peptidoglycan biosynthesis
vap01100  Metabolic pathways
vap01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Vapar_0921
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Vapar_0921
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Vapar_0921
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vap01011]
    Vapar_0921
Enzymes [BR:vap01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Vapar_0921
Peptidoglycan biosynthesis and degradation proteins [BR:vap01011]
 Precursor biosynthesis
  Amino acid ligase
   Vapar_0921
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 ATPgrasp_ST GARS_A ATP-grasp CPSase_L_D2 TTL
Other DBs
NCBI-ProteinID: ACS17572
UniProt: C5CNF6
LinkDB
Position
1:1015122..1016093
AA seq 323 aa
MSLQDPKQFGKVAVLFGGSSAEREISLLSGNGVLEALRSRGVDAHAFDPAERDLVELRRE
GFARCFIALHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPR
YVRLAFDQQSREQVRAVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAVTLSARYDAD
VLCEEFIEGEEVTCAVLGQGLDARALPVVRIAAPEGAYDYQNKYFTDDVKYHCPSGLPEA
EEHEIQRITLAAYHTLGCRGWGRADVMIRASDRKPFLLEMNTSPGMTSHSLVPMSARASG
IAYEDLCLRVLASASLDAAGGAQ
NT seq 972 nt   +upstreamnt  +downstreamnt
atgagccttcaggatcccaagcaattcggcaaggtggccgtgctgttcggcggaagctct
gccgagcgcgaaatctcgctcctgtccggcaacggcgtgctcgaggcgctgcgctcgcgc
ggcgtcgatgcgcatgccttcgatcccgccgagcgcgacctggtcgagctgcggcgcgag
ggcttcgcgcgctgcttcatcgcgctgcatggccggcatggcgaggacggcacggtgcag
ggcgcgctcgagctgctcggcattccctacaccggctcgggcgtgatggcttcgagcgtg
gccatggacaaggtcatgaccaagcgcatctggcaggccgacggcctgccgacgccccgg
tacgtgcgcctggcgttcgatcagcaaagccgcgagcaggtccgcgccgtgcccgacgtg
ctgggcctgccgctgatcgtgaagccgccgcgcgagggctcgtcgatcggcgtgaccaag
gtcgagggctattcgcagatgcaggacgcggtgacgctgtcggccaggtacgacgccgac
gtgctgtgcgaggaattcatcgagggcgaggaagtgacctgcgccgtgctcggccagggg
ctcgacgcgcgcgcgctgccggtggtgcgcattgccgcacccgaaggcgcctacgactac
cagaacaagtacttcaccgacgacgtgaagtaccactgcccgagcgggctgcccgaagcc
gaggagcacgagatccagcgcatcacgctggccgcgtaccacacgctcggctgccgcggc
tggggccgcgccgacgtgatgatccgcgcgagcgaccgcaagcccttcctgctcgagatg
aacacctcgcccggcatgaccagccattcgctggtgcccatgtcggcgcgcgcatcgggc
attgcctacgaagacctgtgcctgcgcgtgctggcctcggcttcgctggatgccgcaggg
ggagcgcaataa

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