Variovorax paradoxus S110: Vapar_1968
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Entry
Vapar_1968 CDS
T00916
Name
(GenBank) alpha amylase catalytic region
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vapar_1968
Enzymes [BR:
vap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Vapar_1968
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
Vapar_1968
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ACS18614
UniProt:
C5CVG5
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All DBs
Position
1:complement(2107331..2108995)
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AA seq
554 aa
AA seq
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MINDLWYKNAVVYCLSVGTFMDSNGDGCGDFEGLTRRLEYLHGLGVTTLWLMPFHPSPRQ
DDGYDVSDFYNVDPRFGTLGDFVEFTHSASRLGMRVLMDLVVNHTSDQHPWFQQARRDRK
SKYHNWYVWSDRKPARYTDGVVFPGVQKSTWTFDKLARRWYFHRFYEFQPDLNTANPDVQ
AEILKIMGFWTQMGVSGFRMDAVPFVIGAKGPRVVRPTEKFDMLRQFRELLQWRRGDAII
LAEANVLPSTNMAYFGDEGERLHMMFNFQVNQHLFYAMAVADARPLAKALEATRARPATS
QWGIFLRNHDELDLGRLRPAQRQRVFAAFGPEKDMQLYDRGIRRRLAPMLGGNRRRLELA
YSLMLTLPGTPVVRYGDEIGMGDDLSLPERNCARTPMQWSTERQGGFTTSSKPVLPVITG
GAYGFEHVNVAAQRRDPESLLNWMERVFRMRKEVPEIGWGDFEVVPNEERAVLVMRYEWR
GNAAVFVHNLGDSPLEIKLGAKALGRHGGQLINLLSNAHSRANSKGKHCMLLEPYGYRWF
RVGPLDYLLKREEM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgacctttggtacaaaaacgccgtggtgtattgcctctccgtgggaaccttc
atggactccaacggcgatggctgcggcgacttcgaggggctgacacggcggctggagtac
cttcacggcctgggtgtcacgaccctgtggctgatgcccttccatccatcgccgaggcag
gacgacggctacgatgtttcggacttttacaacgtcgatccccgcttcggcacgctcggc
gatttcgtcgagttcacgcactcggcttcgcgccttggcatgcgcgtgctgatggacctg
gtggtgaaccacacctcggaccagcacccgtggttccagcaggcacgcagggaccgcaag
tcaaagtatcacaactggtatgtgtggtccgacaggaagccggcccgctacaccgatggt
gtggtcttcccgggcgtgcagaaatcgacctggaccttcgacaagctcgcaaggcgctgg
tacttccaccgcttctacgaattccagcccgacctgaacaccgccaaccccgacgtgcag
gccgagatcctgaagatcatgggcttctggacccagatgggcgtctcgggtttccgcatg
gacgccgtgcccttcgtgatcggcgccaagggcccgagggtggtgcgcccgaccgagaag
ttcgacatgctgcggcagttccgcgaactgctccagtggcgccggggcgacgcgatcatc
ctcgccgaggccaacgtgctgcccagcaccaacatggcctacttcggcgacgagggcgag
cggctgcacatgatgttcaacttccaggtcaaccagcacctcttctatgcgatggccgtg
gccgacgcgcggccgctggccaaggcgctggaggcgacccgggcgcgccccgcgacctcg
cagtggggcatcttcctgcgcaaccacgacgagctcgacctgggccgcctgcggcccgca
cagcgccagcgcgtgttcgccgccttcggccccgaaaaggacatgcagctgtacgaccgc
ggcatacgccgcaggctggcaccgatgctcggcggcaaccggcggcgcctcgagctggcc
tacagcctgatgctcaccctgcccggcacgccggtggtccgctacggcgacgagatcggc
atgggcgacgacctgagcctgccggagcgcaactgcgcgcgcacgccgatgcagtggtcc
accgagcgccagggcgggttcaccacctcttccaagccggtgctgccggtgatcacgggt
ggtgcctacggcttcgagcatgtgaacgtggcggcgcagcggcgcgaccccgagtcgctg
ctcaactggatggaacgcgtgttccgcatgcgaaaggaagtgcccgagatcggctggggc
gacttcgaggtggttcccaacgaggagcgcgcggtgctcgtcatgcgctacgaatggcgc
ggcaacgcggcggtcttcgtgcacaacctgggcgacagcccgctggaaataaagctcggc
gccaaggcgctcggcaggcacggcgggcagctgatcaacctgctctccaacgcgcacagc
cgcgccaactcgaagggaaagcactgcatgctgctggagccctacggctaccggtggttc
cgcgtcggcccgctcgactatcttctcaagcgcgaggagatgtga
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