Variovorax paradoxus S110: Vapar_2332
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Entry
Vapar_2332 CDS
T00916
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
vap
Variovorax paradoxus S110
Pathway
vap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Vapar_2332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_2332
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Vapar_2332
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Vapar_2332
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ACS18959
UniProt:
C5CYK0
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All DBs
Position
1:2496949..2497539
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AA seq
196 aa
AA seq
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MADASSLDALVDALRRLPGVGVKSASRMAFHLLQHDREGAQLLARALQQAAGNVRHCERC
NTFTEAPVCSVCLDARRDASKLCVVETPADQAALERTGAFRGYYFVLMGKLSPLDGIGPK
DIGLQKLFDRALDGTVSEVILATNFTAEGEATAHVIGEALRQRGLNVTRLARGVPAGSEL
EYVDLGTIAHALVDRR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccagttcgctcgatgcgctggtcgatgcgctgcgccgcctgcccggcgtc
ggcgtcaagtcggcctcgcgcatggccttccacttgctgcagcacgaccgcgagggcgcg
cagctgcttgcgcgcgcgctgcagcaggcggccggcaacgtgcggcattgcgaacgctgc
aacaccttcaccgaagcaccggtctgcagcgtgtgcctcgacgcgcgccgcgacgcaagc
aagctctgcgtggtcgagacgccggccgaccaggccgcgctcgaacgcaccggggccttc
cgcggctactacttcgtgctgatgggcaagctcagtccgctcgacggcatcggacccaag
gacatcggcctgcagaagctcttcgaccgcgcgctggacggcaccgtgagcgaggtcatc
ctggccaccaacttcacggcggagggcgaagccaccgcgcacgtgatcggcgaagcgctc
cggcagcgcggcctcaacgtgacgcgcctcgcgcgcggcgtgcctgccggcagcgaactc
gaatacgtggatctcggcaccatcgcgcatgccctggtggaccgccgatag
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