Variovorax paradoxus S110: Vapar_3023
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Entry
Vapar_3023 CDS
T00916
Name
(GenBank) Phosphoglycerate kinase
KO
K00927
phosphoglycerate kinase [EC:
2.7.2.3
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00710
Carbon fixation in photosynthetic organisms
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01230
Biosynthesis of amino acids
Module
vap_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
vap_M00002
Glycolysis, core module involving three-carbon compounds
vap_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
vap_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vap_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_3023
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Vapar_3023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_3023
Enzymes [BR:
vap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.2 Phosphotransferases with a carboxy group as acceptor
2.7.2.3 phosphoglycerate kinase
Vapar_3023
Exosome [BR:
vap04147
]
Exosomal proteins
Proteins found in most exosomes
Vapar_3023
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PGK
Motif
Other DBs
NCBI-ProteinID:
ACS19642
UniProt:
C5CP15
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All DBs
Position
1:complement(3180741..3181922)
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AA seq
393 aa
AA seq
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MSFNTLDQVDLRGQRVFIRCDLNVPLDASGRISDDTRIRASLGGIRHALSQGARVMVASH
LGRPKEGRLAPGESLAPVAKRLGELLGAPVALVADWIDRPFDVAPGEVALLENCRANVGE
KANAEALARRMAALCDVYVNDAFGTAHRAEATTEALARLAPIACAGPLMASELHALGRAL
ANPARPLAAIVGGAKVSTKLSILESLAAQVEWLVVGGGMANTFLLAAGHPIGRSLCEPEM
VDTARAVAAALAARGAQLFMPTDVVTATEFSPTARATVKAVADVAPDDMILDFGPESVAR
LVAMLGQCKTIVWNGPLGVFEIEQFSHGTRTLAHAIARMDAFSLAGGGDTVAAINQFEVE
ECIDYVSTAGGAFLEFLEGKSLPAVKALQDRRH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaacacgctcgaccaggtcgacctgcgcggacagcgcgtgttcatccgctgc
gacctcaacgtgccgctcgatgcctcggggcgcatcagcgacgacacgcgcatccgcgcc
agcctgggcggcatccgccatgcgctgtcgcaaggggcgcgcgtgatggtcgcctcgcac
ctgggccgcccgaaggaaggccggcttgcacccggcgaatcgctggcgccggtggcgaag
cggctcggcgagctgctgggcgcgccggtggcgctggtggccgactggatcgaccgcccc
ttcgacgtggcacccggcgaggtggcgctgctcgagaactgccgcgcgaacgtcggcgag
aaggccaatgccgaagccctggcgcggcgcatggcggccctgtgcgacgtgtacgtgaac
gatgccttcggcaccgcgcaccgcgccgaggccaccaccgaggcgctggcccggctcgcg
cccattgcctgcgccggtcctctgatggcgtcggaactccatgcgctcggccgtgcgcta
gcgaaccccgcgcggccgctggccgcgatcgtcggcggcgccaaggtgtcgaccaagctg
tcgatcctcgaatcgctcgccgcgcaggtcgagtggctggtggtgggcggcggcatggcc
aacaccttcctgctcgcggcgggccatccgatcggccggtcgctgtgcgagcccgagatg
gtggacaccgcgcgtgccgtggccgcggcgctcgcggcgcgcggtgcgcagcttttcatg
ccgaccgacgtggtcacggccaccgagttctcgccgacggcgcgcgcgaccgtgaaggcc
gtggccgacgtggcgcccgacgacatgatcctggacttcggcccggagtcggtggcgcgg
ctcgtcgcgatgctcggccagtgcaagaccatcgtctggaacggcccgctcggcgtgttc
gagatcgagcagttctcgcacggcacgcgcacgctggcccacgcgatcgcgcgcatggat
gcgttctcgctcgcgggcggcggcgacaccgtggccgccatcaaccagttcgaggtggag
gagtgcatcgactacgtctcgacggcgggcggcgccttcctcgaattcctcgaaggcaag
agcctgccggccgtcaaagcgctccaggaccggcggcattga
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