Variovorax paradoxus S110: Vapar_3344
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Entry
Vapar_3344 CDS
T00916
Name
(GenBank) inner-membrane translocator
KO
K10440
ribose transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_3344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_3344
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_3344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
SPC25
Integrase_Zn
DUF4381
Motif
Other DBs
NCBI-ProteinID:
ACS19962
UniProt:
C5CS11
LinkDB
All DBs
Position
1:3523492..3524583
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AA seq
363 aa
AA seq
DB search
MSSSIKSTALEPDKSLDGEAVSFAQRIGRAMPVYGLVALMAGLALLFSLLLPDTFPTLFN
LRAILADKSVIALLALAATIPMITGKIDLTVGYGIVLWHILAISLQTQFGLPWPAAVLIV
LLCAALFGVLNGLLVELAQIDSFIATLGTGTVIYAVAMWHSGGRQVVGDLPDGFVGIAGG
SLLGLPVGAFYVLAVSVTLWVVTEFTPLGRALYVIGANPKAAQLNGIAVRKHVMGAFVAS
GLLSGFAGVLLASRLQIGQASVGLEFLLPALVGAFLGSTTIRPGRVNVWGTLVGVAILAI
GISGIQQFGGAFYVEPLFNGLTLLVSIGIAGWAQQRRNRSIKRRIAERQLDHAQQPVPST
PSK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcgatcaaatccaccgccctggagcccgacaagtcgctcgacggcgaggcc
gtttccttcgcgcagcgcatcggccgcgcaatgccggtctatggcctcgtggcgctgatg
gcgggcctcgccctgctgttctcgctgctgctgcccgacacctttccaacgctgttcaac
ctgcgcgcgatcctggccgacaagtcggtgatcgcgctgctggcgctcgccgcgaccatc
ccgatgatcaccggcaagatcgacctcacggtgggctacggcatcgtgctgtggcacatc
ctcgcgatcagcctgcagacgcagttcggcttgccgtggccggccgcggtgctcatcgtg
ttgctgtgcgcggccttgttcggcgtgctcaacggcctcctggtcgagcttgcgcagatc
gactccttcattgccacgctgggcaccggcaccgtgatctatgcggtcgcgatgtggcac
agcggcggacgccaggtggtgggcgacctgcccgatggcttcgtcggcatcgcgggcggc
agcctgctgggcctgcccgtcggcgccttctacgtgctcgcggtgagcgtcacgctctgg
gtcgttaccgagttcacgccgctgggccgcgcgctgtacgtgatcggcgccaacccgaag
gcggcgcagctcaacggcatcgcggtgcgcaagcatgtgatgggtgccttcgtcgcatcg
ggcctgctctcgggctttgcgggcgtgctgctcgcctcgcgcctgcagatcggccaggcc
agcgtggggctggagtttttgctgcctgcgctggtcggcgccttcctcggctccaccacc
atccggccgggccgcgtgaacgtgtggggcacgctggtgggcgtggcgatcctggccatc
ggcatctcgggcatccagcagttcggcggtgccttctatgtcgagccgctcttcaacggg
ctcacgctgctggtgtccatcggcatcgcgggctgggcgcagcagcggcgcaaccgctcg
atcaagcggcgcatcgccgagcgccagctcgaccatgcgcaacaaccggttccctcaacg
ccgtcgaagtga
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