Variovorax paradoxus S110: Vapar_3462
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Entry
Vapar_3462 CDS
T00916
Name
(GenBank) protein of unknown function UPF0079
KO
K06925
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vap03016
]
Vapar_3462
Transfer RNA biogenesis [BR:
vap03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Vapar_3462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TsaE
AAA_22
AAA_16
AAA_33
NACHT
cobW
ABC_tran
nSTAND3
AAA_11
AAA_18
AAA_19
PRK
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ACS20079
UniProt:
C5CSX2
LinkDB
All DBs
Position
1:3646231..3646740
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AA seq
169 aa
AA seq
DB search
MADDHLPIVETPKNAGRTLHWRSEEDTDAFARALADSPALRDAFIALHGDLGAGKTTFVR
HLLRALGIEGRIKSPTYAVVEPHEAPDGLAIFHFDFYRFNDPREWDDAGFRDIFAGPGLK
LAEWPENAAGRTPIADLAIKIEAMTDDTRSVTLLANTPRGSTLLTQLGA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatcacttgccgattgtagaaacgccgaagaacgccggccgcacgctgcac
tggcgcagcgaagaagacaccgacgccttcgcgcgcgcgctggcggactcgcccgcgctg
cgcgatgccttcattgcgctgcacggcgacctcggcgccggcaagaccaccttcgtgcgc
cacctgctgcgcgcgctcggcatcgagggccgcatcaagagcccgacctatgccgtggtc
gagccgcacgaagcgcccgacggcctagccatcttccatttcgatttctaccgcttcaac
gatccgcgcgagtgggacgacgccggcttccgtgacattttcgcgggtccgggcctcaag
ctcgcggagtggccagagaacgctgccggccgcacaccaattgccgacctcgctattaaa
atagaagcaatgacagacgacacacgcagcgtgaccctcctggcgaacactccccgcggc
agcaccctgctgacgcagctcggcgcatga
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