KEGG   Variovorax paradoxus S110: Vapar_3462
Entry
Vapar_3462        CDS       T00916                                 
Name
(GenBank) protein of unknown function UPF0079
  KO
K06925  tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vap03016]
    Vapar_3462
Transfer RNA biogenesis [BR:vap03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Vapar_3462
SSDB
Motif
Pfam: TsaE AAA_22 AAA_16 AAA_33 NACHT cobW ABC_tran nSTAND3 AAA_11 AAA_18 AAA_19 PRK RNA_helicase
Other DBs
NCBI-ProteinID: ACS20079
UniProt: C5CSX2
LinkDB
Position
1:3646231..3646740
AA seq 169 aa
MADDHLPIVETPKNAGRTLHWRSEEDTDAFARALADSPALRDAFIALHGDLGAGKTTFVR
HLLRALGIEGRIKSPTYAVVEPHEAPDGLAIFHFDFYRFNDPREWDDAGFRDIFAGPGLK
LAEWPENAAGRTPIADLAIKIEAMTDDTRSVTLLANTPRGSTLLTQLGA
NT seq 510 nt   +upstreamnt  +downstreamnt
atggctgacgatcacttgccgattgtagaaacgccgaagaacgccggccgcacgctgcac
tggcgcagcgaagaagacaccgacgccttcgcgcgcgcgctggcggactcgcccgcgctg
cgcgatgccttcattgcgctgcacggcgacctcggcgccggcaagaccaccttcgtgcgc
cacctgctgcgcgcgctcggcatcgagggccgcatcaagagcccgacctatgccgtggtc
gagccgcacgaagcgcccgacggcctagccatcttccatttcgatttctaccgcttcaac
gatccgcgcgagtgggacgacgccggcttccgtgacattttcgcgggtccgggcctcaag
ctcgcggagtggccagagaacgctgccggccgcacaccaattgccgacctcgctattaaa
atagaagcaatgacagacgacacacgcagcgtgaccctcctggcgaacactccccgcggc
agcaccctgctgacgcagctcggcgcatga

DBGET integrated database retrieval system