Variovorax paradoxus S110: Vapar_5753
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Entry
Vapar_5753 CDS
T00916
Name
(GenBank) Citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00630
Glyoxylate and dicarboxylate metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
vap01230
Biosynthesis of amino acids
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vap_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_5753
00630 Glyoxylate and dicarboxylate metabolism
Vapar_5753
Enzymes [BR:
vap01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
Vapar_5753
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ACS22342
UniProt:
C5CZZ8
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Position
2:459588..460742
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AA seq
384 aa
AA seq
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MASWISMTEACKLLGVQPQTIYAYVSRGKLEVMPDPADTRRRLYRTEDVAGLARRKQAGR
KHETLAANTLFGSEPSIPTALSAFSRGRPYYRGRDAVRMARTATLEDAAQLLWGAEHAVD
FTCMASLRSGKPGRGAAFAALASLAAAGHSTGGRLTRVLHAESQDLVGRLANAFGASPGH
EPLHLRFAKGWKQPAKVADLLRTALVLLADHELTSSAFAARIAASTGASLPACLLAGLTT
LSGPLHGDASGRVRALFSEVERLGEDQVLAHHLSNGLSLAGFGHHLYPDGDPRAAALLAL
FEPPKVIARFIAKVTKLTGLQPNIDVALAAMAAHHRLPADAAFGLFATARSVGLLAHSLE
QLGTAQVIRPRGRYVGPVPEALGA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctggatttcgatgaccgaggcgtgcaagctcctgggcgtgcagccccagacg
atctacgcgtacgtgagccgcggcaagctcgaggtcatgcccgacccggccgacacgcgg
cgcaggctctaccgcaccgaggacgtggccggcctggccaggcgcaagcaggccggccgc
aagcacgagacgctggccgccaacacgctgttcggctcggagcccagcattcccacggcc
ctcagcgcgttctcgcgcgggcggccgtactaccgcggccgcgatgccgtgcgcatggcc
cggaccgccacgctcgaagatgcggcgcaactgttgtggggcgccgaacatgccgtcgac
ttcacctgcatggcgtccctgcgttccggcaagcccgggcgaggcgcggccttcgcggcc
ttggccagcctggcggccgccggccattccaccgggggccgcctgacccgggtgctgcat
gccgaaagccaggacctggtgggccggctggccaatgcgttcggcgcatcaccgggccat
gagccgctgcatcttcgctttgcgaaaggatggaagcagcccgccaaggtggccgatctg
ctgcgaacggccctggtgctgctggccgatcacgaactgaccagctcggcctttgccgcg
cgcattgccgcttcgacgggcgcctcgctgcccgcatgcctgcttgcgggattgaccacg
ctctccggccccttgcacggcgatgcctcgggacgcgtgcgcgcgctgttcagcgaggtg
gaacggctgggcgaagaccaggtgctcgcccaccacctctcgaacggcctgtcgctcgcc
ggattcggccatcacctctaccccgacggcgacccgcgcgcggccgcgctgctggccttg
ttcgagcctcccaaggtgattgcgcgcttcatcgcaaaggtgaccaagctgaccggcctg
cagcccaacatcgacgttgcgctggccgccatggccgcgcaccatcggctgcctgccgat
gcggccttcggcctgttcgccactgcgcgcagcgtcgggctcctggcgcacagcctggag
cagctgggcacggcgcaggtgatccggccgcgcgggcgctatgtggggccggtgcccgag
gcgcttggcgcgtag
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