Vigna angularis (adzuki bean): 108320662
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Entry
108320662 CDS
T04660
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03420
Nucleotide excision repair
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108320662
09124 Replication and repair
03420 Nucleotide excision repair
108320662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
var03051
]
108320662
03400 DNA repair and recombination proteins [BR:
var03400
]
108320662
Proteasome [BR:
var03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108320662
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108320662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
CUE
Rad60-SLD
TECR_N
UBA_3
Colicin_E5
Ubiquitin_2
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
108320662
NCBI-ProteinID:
XP_017407650
LinkDB
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Position
Un
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AA seq
371 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV
ENKVSEDGFLVVMLSKSKASGSSAAPSVQPASSPATTVSTSNSNPAPDPPVQTQAANNST
SSTDAPITNVSADTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE
RAIDYLYSGIPEPAEVAVPVPNYPGSQTTETAGIPSGAVPVGPNSSPLNMFPQETISSTG
AGLGSLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRMIQEHHGEFLQLINE
PVDGSEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAAN
YLLENAGDFED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacggtgaagactttgaaaggcagccatttcgaaattagggttcagccctcc
gacactgttatggctgtcaagaagaatattgaagatgtacagggcaaagataattacccg
tgtggtcagcaattgttgattcacaatggcaaggttttgaaagatgaaactacattagtt
gagaacaaagtctctgaagatggctttcttgttgttatgcttagcaagagtaaagcatca
ggctcttctgcagctccatctgttcagcctgccagcagtcctgctacaactgtatcaaca
tccaattccaacccagctcctgatcctccagtgcagactcaggctgcgaacaacagcaca
tctagcacggatgccccaattaccaatgtttctgcagacacttatggtcaggctgcatcg
aatttagttgctggtaataatcttgagcagactattcaacaaatcatggacatgggcggt
ggcaattgggacagagacactgttagtcgtgctcttcgggcagcttataataacccagag
cgggcgattgattacttgtattctggaatccctgaaccagcagaagttgctgtgccagtt
cctaactacccaggtagtcaaacaactgaaacagctgggattccttctggagcagttcct
gtaggacctaattcatctcccttaaatatgtttcctcaggagacaatttcaagtactggg
gccggacttggatctctggacttccttagaaataatccccagtttcaagctttgcgttca
atggtgcaatccaatccacaaattctccagcctgtgcttcaagaactgggtaagcagaat
cctggtcttttaagaatgattcaagagcatcatggggagtttctccagttgataaatgaa
cctgttgatggttctgaaggagatatatttgaccaacctgagcaagacatgcctcatgcc
atcaatgtgactccagctgagcaggaggcaattggaaggcttgaggcaatgggatttgat
agagcttcggtgatagaggcatttttggcatgtgaccgtgacgagcaattggcagcaaac
tacttattggagaatgctggagactttgaagattaa
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