Vigna angularis (adzuki bean): 108321029
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Entry
108321029 CDS
T04660
Name
(RefSeq) uncharacterized LOC108321029
KO
K13217
pre-mRNA-processing factor 39
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108321029
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108321029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
Motif
Other DBs
NCBI-GeneID:
108321029
NCBI-ProteinID:
XP_017408148
UniProt:
A0A8T0LIM9
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Position
1:complement(4026033..4038683)
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AA seq
1093 aa
AA seq
DB search
MAPILSSGIDGNLNLQEVISKGLSGFDEWTLLISEVEKLYPADVDKICLVYNNFLSKFPL
CHGYWRKYAAHMTCISTTDKVVEVFEKAVLAATYSVGVWFDYCSFGMSAFEDPSDIRRLF
TRAISFVGKDYLCHILWDKYIHFEFSQQQWISLAHIYIQTLKFPTKKLHQYYDSFKKLLT
ILEEGIANHELQSETCFDCEIPMVTCYKDGEIYHIINDMMDSSVGLTSSVALKRYRAIGE
MLYHNACELYSKISPFEASIRRHYFHVQPLDANQLQNWHNYLDFIELQGDFDWAVKLYER
CLIVCANYPEYWMRCVDFMEAKGGREIANYSLDRATEIYLTRVPSIHLFNARFKEQIGDV
FAARAAYVQSCEERDSDFVDNVISKANMEKRLGNTESAFSIYNEALKRAATEEKLHALPI
LYIHFSRLKYISTNSVDAARDVLIDGIRTLPHNKLLLQELIKFSMMHGGTKHMAVIDSII
ADTISPRSDGSQGLSAEDAEDISNLYLEFVDYIGTIHDVRKAWNRHIKLFPDSARKDLHE
QSARHRKLLNLMDKREDISIVTPNQASRDSISDLQEHLHKKDEKTALLKCCENQYDATNG
GSLLGKNKSTRSNDTDAYKLQSMELNDKIEENRREFPLPVSEEPKENDPENNVPSSHLVE
VKEESTRVVKNLKNSSESDVSSEEFLRQTGRGNQSSHAFQTPSNKNTYFSKGKREVESEE
LKAHSLTSMSSKSRESTCPDSGPMVSQECVAIPESHKENTRAIIGGHTINQENSASTQDS
GYNQVYIETKSPYSARYRDQRSRKPFLPPRSSGNSGGNWHRRRNAGQFKGPKFGYRGNTD
RKQHLRQQLSPQQIHPPEGGAQMAGAPDYSSQPVLQVQQCNPGKNQFQSTATTTGLVAAH
CWPMQNMQMQNTSSQSQTPGNATSLVLQHPMQGNDQYGYMQNAQEYSQLCQYYYYQQQQQ
LQHYIQLQQQPFQKEQSLQLQHSPLEPLQPQQLQHSPLEPLQPQQLQQQQLQHSLLEPLQ
PQQLQQQVLQQQQYYQQQQPSTQLQSSSHPVENQGQVILSSQSNGAIVSQQSDRLGSISS
PVLDHSQEKSTQE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgatactttcgtcaggtattgatggcaatctcaatcttcaagaagttatttct
aagggcttatcaggttttgatgaatggactttactgatttcagaggttgagaaattatat
ccggctgatgtggacaagatatgtctggtttataataatttcttgtccaaatttcctttg
tgtcatgggtattggaggaagtatgctgcccacatgacatgcatatccaccacagataag
gttgttgaagtgtttgaaaaagctgtgttggcagcaacatattcagtcggtgtgtggttt
gattactgcagctttggcatgtcagcttttgaggacccatccgatattcggagattgttc
actagagccatttcctttgttgggaaggactacttatgtcatatcttgtgggacaagtat
attcactttgagttttcccagcagcagtggatttctcttgctcacatttatatccaaaca
cttaagtttccaaccaaaaagttgcaccagtattatgatagttttaaaaagttactaacc
attttggaggagggcatagcaaaccatgaattgcaatcagagacatgttttgattgcgaa
attcctatggttacatgttacaaggatggtgagatttatcacattatcaatgatatgatg
gattcatctgttggattgactagttcagtagccctaaaaaggtacagggcaattggagaa
atgctttatcataatgcatgtgagctgtattcgaaaattagtccctttgaggctagtatt
cgaagacactactttcatgttcagcctcttgatgcaaatcaattgcagaattggcataat
tatctggactttattgaacttcaaggggactttgactgggctgtgaaactttatgagaga
tgtttgattgtgtgtgccaactatcctgaatactggatgcgttgtgtggacttcatggaa
gccaagggaggaagagaaatcgcaaactattctttagaccgagcaactgaaatttatttg
acgagggtgccatcaatccatttattcaatgccaggtttaaggaacaaataggagatgtt
tttgctgctcgtgctgcatatgttcaaagttgtgaagagagagattcagactttgtggac
aatgttatatcaaaagctaatatggaaaaacgtttgggaaatacagagtcagctttcagt
atatacaatgaagcactgaaaagggccgctacagaggaaaagttacatgcactcccaatt
ttatacatacatttctctcggctaaaatatattagtacaaatagtgtggatgctgccaga
gatgtcttaattgatggtatcagaactttgcctcacaacaaattgcttctgcaggagtta
ataaagttctcaatgatgcatggaggtacaaagcacatggctgtaatagattcaattatt
gctgatacaatatctccaaggtctgatggatcacaaggtttgagtgcagaagatgcagag
gatatatcgaacttatacctggagtttgttgactatatcggaactatacatgatgtaagg
aaggcgtggaatcggcacataaaattatttccagactctgctcggaaagatttacatgag
caatctgctaggcatagaaaattgcttaatttgatggacaagcgtgaagatatttctatt
gtcactcccaatcaagcatctagagattctatttctgatttgcaagaacatttacataaa
aaagatgagaaaacggcattgctgaaatgttgtgagaaccagtatgatgctactaatggt
ggatcactgttggggaaaaataaaagtactcgatctaatgatacagatgcatacaagctt
caaagtatggaattaaatgacaaaatagaagaaaataggagggaatttcctcttcctgtt
tctgaggaaccaaaggagaatgatcctgaaaataatgtgccatcttcccatttagtggaa
gtaaaagaggaatcaaccagagttgttaagaatttaaaaaatagttctgaatctgatgtt
tcatcagaagaatttttgcgtcaaactggccgtggaaaccaatcctcacacgcctttcaa
acaccctcaaataaaaatacttatttttccaagggaaaacgtgaggttgagtctgaagaa
ttgaaggcacattctctgacaagcatgtcatcgaaatcccgggaaagcacgtgtcctgat
tcaggaccaatggtatctcaggagtgtgtagcaattccagaaagccataaggaaaatact
agagcaataattggtggtcataccataaatcaggagaactctgctagcactcaagattct
gggtataaccaagtttacattgaaacaaaaagcccatattcagcacgctaccgagaccag
agatcaaggaaaccatttctaccacctcggtcttctggtaatagtggtggaaattggcat
agaaggagaaatgccggtcaatttaaaggaccaaaatttggttataggggaaacacggat
agaaaacagcacctacggcagcagctatctccacaacagattcatccacctgaagggggt
gcacaaatggctggtgctccagattactcctctcaacctgtgttgcaagttcagcaatgc
aatccaggaaaaaatcagtttcaatctactgcgactactactgggttagtggcagctcat
tgttggcctatgcaaaacatgcagatgcagaacacttcatctcagtctcaaacaccaggc
aatgcgacatcacttgtattacaacatccaatgcaaggcaatgaccaatatggatatatg
caaaatgcccaagagtatagtcagttatgccaatactattactaccagcaacaacaacaa
ctacaacattatattcaattacagcagcaaccattccagaaggaacagtcactacaactc
caacatagtccactggaacctcttcaaccgcaacagctccaacatagtccgctggaacct
cttcaaccgcaacagctccaacaacaacaactccaacatagtctgctggaacctcttcaa
ccgcaacagctccaacaacaggttcttcagcagcagcaatattatcaacagcagcaacca
tcaacccagttgcagagcagcagtcatcctgtagaaaaccaagggcaggtaatattgtca
tcgcagagcaatggagcaatagtatcgcaacaatcagacagacttggatcgatttcttct
ccagttttggatcattctcaagagaaatctacccaagagtga
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integrated database retrieval system