Vigna angularis (adzuki bean): 108346640
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Entry
108346640 CDS
T04660
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108346640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108346640
Enzymes [BR:
var01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
108346640
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
108346640
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
108346640
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108346640
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108346640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
Macro
zf-C2HE
AAA_33
HIT
Zeta_toxin
AAA_16
AAA_18
POT1
AAA
Motif
Other DBs
NCBI-GeneID:
108346640
NCBI-ProteinID:
XP_017441188
LinkDB
All DBs
Position
11:16782419..16787551
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AA seq
760 aa
AA seq
DB search
MDMMDVDETSAPREGKPVLVILVGAPGSGKSTFGEDVMRSSTRHWVRVCQLQLRFKAMKT
GLGVLVRRGKLMGNVIDRCNLDREQRSEFIKLGGGLQIDVHAVVLDLPAKLCISRSVNRT
GHEGNLQGGRAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINLYSSLGPLDNLP
HGCFGQKNTDSKIQVGIMKFLKRAEVPLAAASTTSGTEEPTSQTPRNNSYCKDKEALSSI
SDTDNLETKEVERQEVGSAGSHANPVCPDDIPTLAFPSISTSDFQFNLEKAADIIVEKVA
EFLNKFRNARLVLVDLSHKSKILSLVKARIAEKNMDTQKFFTHVGDITHLYSRGGLRCNA
IANAANWRLKPGGGGVNAAIFNAAGPELESATKDKVKSLSPGNAAVVPLPSSSPLFTREG
VTHVIHVLGPNMNPQRPNYLNNDYNKGCKILQDAYTSLFDGFASIVRNHPGIPEGKGEKL
ERKSLELPVQSDCSSRKYFTGTDQKSKRSDDHGSEKSKKCKGTQDDLGLPFTDSKGEKVD
SEHRRIERSRSKAWGSWAQALHQIAMHPEKHKGDLLEISDDVVVLNDIYPKAQKHVLVLA
RTGGLDCLADVQKEHLQLLNMMHDVGLKWAEKFLSENASLVFRLGYHSAPSMRQLHLHVI
SQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEVSSDGKATLKDDDKLLSMELRCHRCRSA
HPNIPRLKSHIRSCQSPFPAYLLQNGRLVHAPGEPRNSVQ
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatggacgtggatgaaacttctgcacccagagagggcaagcccgttttggtg
atcctggtaggagcacccgggagtggtaaatccaccttcggcgaagatgtaatgcgttca
tctactcgccactgggttcgcgtttgccagttgcaactacgcttcaaagccatgaaaaca
ggcttgggggtgttggttcgtcgtgggaaattaatgggaaatgttattgacaggtgcaat
cttgacagagaacagcggtcagaattcataaagcttggtggtggactccaaatagatgtc
catgcagttgtacttgatcttcctgcgaagctttgtatttctcgatcagtcaatcgaact
gggcatgaaggaaatttgcagggtggaagagcagctgcagttgtgaatagaatgcttcaa
cataaagagcttcccaaattaagtgaaggctttaaccggataacattttgtcagaatgag
aatgatgtaaaaaatgcgattaatttatacagctcacttgggccactggataatcttccg
catggctgctttggccagaagaatacagattcgaaaattcaagttggcataatgaagttc
ctaaaaagagcagaggtcccacttgctgctgcatctacaacgagtggcactgaagagcct
acttcccagactccgagaaataattcgtactgcaaagataaggaagcactttcctcaatt
tcagatactgacaacttagagacaaaggaagtagaaaggcaagaagttggttctgctggt
tcgcatgccaatccagtttgtccggatgatattccaactctggcatttccctctatttca
acatctgatttccaattcaatcttgagaaggcagctgatattatcgttgagaaggttgca
gagttcttaaataagtttaggaatgccagacttgttcttgttgacttatctcataagtca
aagattttgtccttagttaaagccagaattgcagaaaaaaacatggacacccaaaagttt
tttacccatgttggggacattactcatctttattccaggggaggtttgcgatgcaatgcc
attgctaatgctgccaactggaggttgaaacctggaggtggaggtgttaatgcagcaatt
tttaatgctgcaggtccagaactggagtctgcaacaaaagataaagtaaaatctctttca
cctgggaatgctgctgttgtccctctgccttcatcttctcctttgttcaccagagagggt
gtaacccatgtaatacatgttcttggacctaatatgaacccacaaagaccaaattatcta
aataatgattataataaaggctgcaaaattctgcaagatgcttatacttcactctttgat
ggttttgcgtctattgtgcggaaccacccagggataccagagggaaaaggtgaaaagctt
gaaaggaaatcattggagttgccggttcagtctgattgttcttccagaaaatattttaca
ggtactgatcaaaagagtaagagaagtgatgatcatggatcagagaaaagcaagaaatgc
aagggaactcaggatgacttaggattgccctttactgattctaagggtgaaaaggtagat
tcagagcatagaagaatagagaggagcaggagtaaggcttggggatcatgggctcaagct
cttcaccaaatagctatgcatcctgaaaagcataagggtgatttgcttgaaatttccgat
gatgttgttgtattgaatgatatctatccaaaggcgcagaagcatgttctggtgttggca
cgaactgggggtcttgactgcctcgctgatgtccaaaaggagcaccttcagttattgaac
atgatgcacgatgtgggtttaaagtgggctgagaagttcttaagcgagaatgcttctctg
gtatttcgacttgggtatcactcggcaccatcgatgcgacaactacatttacatgttatt
agccaggactttgaatcaacacaattaaagaataagaagcactggaactcatttaacact
gctttctttcgtgactcggttgatgtaatggatgaggtctctagtgatgggaaggcaacg
ttgaaagatgatgacaagctactctctatggagttgaggtgccacagatgtagaagtgca
catccaaacataccccggttaaaatctcatataagaagctgccaatccccatttcctgca
tacctacttcagaatggacgtttagtgcatgctccgggggaacctcgcaacagtgtacag
tag
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