Vibrio anguillarum NB10: VANGNB10_cI1250c
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Entry
VANGNB10_cI1250c CDS
T03657
Symbol
rsmF
Name
(GenBank) Ribosomal RNA small subunit methyltransferase F
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vau03009
]
VANGNB10_cI1250c (rsmF)
Enzymes [BR:
vau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
VANGNB10_cI1250c (rsmF)
Ribosome biogenesis [BR:
vau03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VANGNB10_cI1250c (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
RsmF_methylt_CI
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
CDQ50164
LinkDB
All DBs
Position
1:complement(1472147..1473568)
Genome browser
AA seq
473 aa
AA seq
DB search
MHANITLPEPFLATIEAILPTHLTMSDFIAACQRPLRKSIRVNTLKISVDSFCQRAVEKG
WALSPVPWCNTGFWIEADESVVPLGNTAEHMAGLFYIQEASSMMPVSALFTGGESFNSVL
DMAAAPGSKTTQIAACMENEGVLVANEFSASRVKVLHANIERCGVRNSALSNFDGRVFGG
WLPEQFDAVLIDAPCSGEGTIRKDPDAMKNWSKESVLSISTTQKDLIESAFQALKPGGVM
VYSTCTLSTEENQQVCLHLKEKYPQSVEFVSLSSLFEDAKAAITDEGFLHIFPQTYDCEG
FFVAKIRKLSSVPHPEVNKRLGQFPFAKANLKLTQEITDQLMKTFEVAIPDDTSVWLRDN
DVWLFPNALEPMLGKFRFSRMGIKIAETHKKGYRWQHQVATSLATGNESNCITLSIEEAR
DWYMGRDVRPTLQTGTGEVLVKLGNDVIGLGKWVGNRIKNGLPRELVKDKNLF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgccaatataaccctacctgaaccttttcttgcgacaattgaagcgatactgccc
actcatttaacgatgagtgattttattgcagcttgccagcgtcctttgcgtaaaagtatc
cgagtcaacacgctaaaaatctctgtcgatagcttttgtcaacgcgccgtagaaaaagga
tgggctttatcaccagtgccttggtgtaatacgggtttttggattgaagccgatgagtct
gtcgtacctttaggtaataccgccgaacatatggcaggtcttttttacattcaagaagcc
agttctatgatgccagtatccgctcttttcactggcggcgaatcgttcaattcagtactc
gacatggcggcggctccgggttcaaaaacaacgcaaattgcggcgtgtatggaaaatgaa
ggcgtattagtcgccaacgaattttcagccagccgtgttaaagtgctgcatgctaatatc
gaacgctgcggtgtacgtaacagtgcactgagcaattttgatggtcgagtctttggcggt
tggttaccggaacaatttgatgcagtgttaatagatgcgccatgctcaggagaaggtacc
atccgtaaagatcctgatgcgatgaaaaactggagcaaagaatctgtattgtcgatttcc
acaacacaaaaagatttgattgaaagtgcgtttcaagctttaaagcccggcggtgtgatg
gtctactcaacctgtacattgagcacagaagagaaccaacaagtgtgcttgcatctaaaa
gaaaaatatccacaatcagttgaatttgtttcccttagctcattgtttgaagatgcaaaa
gcagcgattacagacgaagggttcttgcatatattccctcaaacttatgattgtgaaggt
ttttttgttgcgaaaatccgtaaacttagctctgtaccccaccctgaagtcaacaaacgc
ttaggtcaatttccttttgcgaaagccaaccttaaactcacacaagagatcacggatcaa
ctcatgaaaacgtttgaagttgcgatccccgatgataccagtgtctggctacgtgataat
gatgtatggttatttccaaacgcactggaacctatgctcggcaaattccgcttctctcgc
atggggataaaaatcgctgaaacacataaaaaaggttatcgctggcaacatcaagtcgct
acatcgttagcgactggtaacgaatcaaactgcatcacactatcgattgaagaagcgcga
gattggtacatgggcagagatgtcagaccaacactacaaactggcactggcgaagtgctg
gttaaactcggtaacgatgtgattggcctagggaaatgggtaggaaaccgcataaaaaat
ggtttaccaagagaactcgttaaagataaaaatttgttttaa
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