Nibricoccus aquaticus HZ-65: CMV30_09305
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Entry
CMV30_09305 CDS
T05426
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vbh
Nibricoccus aquaticus HZ-65
Pathway
vbh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CMV30_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbh03400
]
CMV30_09305
DNA repair and recombination proteins [BR:
vbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CMV30_09305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Pol_alpha_B_N
FGase
DUF5427
Motif
Other DBs
NCBI-ProteinID:
ATC64135
UniProt:
A0A290Q628
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All DBs
Position
complement(2295183..2296052)
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AA seq
289 aa
AA seq
DB search
MRAIWKGTISFGLVSIPVSLFPAMRREELKFRLLRSSDHSPVNYKRVAAADGKEVPWDQI
VKGYEYDKGKFVILKDEDFNRVDVEAAQTVDIINFVAIKDVNPLLFYKPYYMEVAKGGDK
AYALLREALVAEGKIGIAKVVIKTRQHLAAVKPQEKGLMLELMHFPDELLDADEFKAPKA
QKVGAKELTMAQNLITSMSSKWRPETYHDDYHEALEKLVEEKLKHRGKDEKPAPRKPKHA
SNVIDLVAVLQESIAATHSRPKTKSASARAKKSKPKAATKSAKPRKKAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaatctggaaaggcaccatcagcttcggcctcgtcagcatccctgtttccctc
ttccccgccatgcgccgcgaagagctgaaattccgcctcctccgctcctccgatcacagc
cccgttaactacaaacgcgtcgccgcagccgacggcaaggaagtcccgtgggaccagatc
gtgaagggctacgagtacgacaaaggcaaattcgtcatcctcaaagatgaggacttcaac
cgcgtcgacgtcgaggccgcacagaccgtcgacatcatcaacttcgtcgcgatcaaagac
gttaacccgctcctcttctacaaaccgtactacatggaggtcgcgaaaggcggtgacaaa
gcctacgcgctcctccgcgaagccctcgttgccgaaggcaaaatcggcatcgccaaagtc
gtcattaaaacccgccagcacctcgccgccgtgaagccccaggaaaaaggcctcatgctc
gagctcatgcacttccccgacgagctgctcgatgccgatgaattcaaagcccccaaagcc
caaaaggtcggcgctaaggaactcaccatggcgcaaaatctcatcacgagcatgagcagc
aaatggcgccccgaaacctaccacgacgactaccacgaagctttggaaaaactcgtcgaa
gaaaaactcaaacaccgcggcaaagacgagaaacccgccccacggaaaccgaagcacgcc
tccaacgttatcgatctcgtcgccgtcctccaggaaagcatcgccgccacccattcaagg
cccaagacgaagtcagccagtgcgcgcgcgaaaaaatccaaacccaaagcggcgacgaaa
tccgccaaacctcgcaaaaaggccgcctga
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