Variovorax boronicumulans: CKY39_03240
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Entry
CKY39_03240 CDS
T05068
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbo03009
]
CKY39_03240
Enzymes [BR:
vbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CKY39_03240
Ribosome biogenesis [BR:
vbo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKY39_03240
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltr_RsmF_N
Cons_hypoth95
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ATA57563
UniProt:
A0A250DUE0
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All DBs
Position
720264..721652
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AA seq
462 aa
AA seq
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MPADLSSDPSSGSATSAPQQPPLWRQLQLTAGALASIRAGTSGTVAFEAVEPALRPGVQA
LGFQVLRWLGRAEALRRHLAKRTPPPLPDALLCTALALAWHSDHAPYEPFTLVDQAVEAA
KRNPATRAQASFINACLRRFLRERDELVAATDTEPVAQWNHPRWWIERLKRDHPRDWQRV
LSADNAQAPMTLRVNALQSTPAAYLLELEAMGLAATRVGADGLQLARARPVQQLPGFADG
ACSVQDAAAQLAAPLLLDGLLPATPGAAPLRVLDACAAPGGKTAHLIERAGPGAVEVTAL
EVDAVRSRRIDETLARLGLKAKVVVADAGRTADWWDGALFDAILLDAPCTASGIVRRHPD
VRWLRRESDTAQLATQQAMLLAALWPLVRPGGRLLYCTCSVFREEGSQQIDAFLVRNTDA
RLLPSPGHLLPQSGANARGVPDNPSGDHDGFFYALLEKPAPH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgccagcagatctttcctccgacccctcttcgggcagcgccacctcggcgccgcaacaa
ccgccgctctggcgccaactgcaactgaccgcaggggcgctggcgtcgattcgcgccggc
acctcgggcaccgtcgcgttcgaggcggtcgagcccgcgctgcgccccggcgtgcaggcg
ctcggcttccaggtgctgcgctggctcggccgcgccgaggcgctgcgccgccacctggcc
aagcgcacgccgccgccgctgcccgacgccttgctgtgcaccgcgctcgcgctggcctgg
cacagcgaccacgccccctacgaacccttcacgctggtcgaccaggccgtggaagccgcc
aagcgcaacccggcgacgcgcgcgcaagccagcttcatcaacgcctgcctgcgccgcttc
ctgcgcgagcgcgacgagctcgtggccgccaccgacaccgaaccggtcgcgcagtggaac
catccgcgctggtggatcgaacgcctcaagcgcgaccatccgcgcgattggcagcgcgtg
ctgtcggctgacaacgcgcaggcaccgatgaccttgcgcgtcaacgcgctgcaatcgacg
ccggccgcgtacctgttggaactggaagcgatgggcctcgcggccacgcgcgtcggggcc
gatggcctgcagctggcccgggcccgcccggtgcagcagctgcccggtttcgccgacggc
gcctgctcggtgcaggacgccgccgcgcagcttgcggcgcccttgctgctcgacggcctg
ctgcctgccacgcccggcgccgcgccgctgcgcgtgctggacgcctgcgccgcccccggc
ggcaagaccgcgcacctgatcgaacgggccggtcccggcgccgtcgaggtgaccgcgctg
gaggtcgacgccgtgcgcagccgccgcatcgacgagacgctcgcgcgcctcggcctgaag
gccaaggtggtggtggccgacgccggccgcaccgccgactggtgggacggcgccctgttc
gacgccatcctgctggacgccccgtgcaccgcttcgggcatcgtgcggcgccatcccgac
gtgcgctggctgcgccgcgagagcgacaccgcccagctggcgacccagcaggcgatgctg
ctggccgcgctctggccgctcgtgcggcccggcggccggctgctttactgcacctgttcc
gtgttccgcgaagaaggctcgcaacaaattgatgcgtttcttgtacgcaacaccgacgcc
cgtttgctgccgtccccgggacacttgctaccccaaagtggggcgaatgcccgtggcgtc
ccggacaatccctctggtgaccacgacggcttcttctacgccctgcttgaaaaacccgcg
ccgcactga
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