Variovorax boronicumulans: CKY39_16400
Help
Entry
CKY39_16400 CDS
T05068
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
vbo
Variovorax boronicumulans
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vbo03029
]
CKY39_16400 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_16400 (bamA)
Mitochondrial biogenesis [BR:
vbo03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
CKY39_16400 (bamA)
Transporters [BR:
vbo02000
]
Other transporters
Pores ion channels [TC:
1
]
CKY39_16400 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
ATA54611
UniProt:
A0A1E7U199
LinkDB
All DBs
Position
3548262..3550694
Genome browser
AA seq
810 aa
AA seq
DB search
MNTNFSRFRLRSVAAVVASTLAATAAWAVEPFTVRDIRVEGLQRVEAGTIFGSLPLRVGD
TYSDERGSAAIRALFDLGLFKDVRIDVNGNVLVVIVEERPTIADVDFVGAKEFDKAALQK
ALREIGLADGRPYDKALADRAEQELKRQYVSRSLYNANVVTTVTPIERNRVNLTFTVTEG
ESARIREVHVVGNKAFSESTLLSLFDQDSGGFMSWYTKSNQYSRAKLNADLETLKSYYIT
RGYLEFRIDSTQVAISPDRKDLSVTVNITEGEKFVVAGIKLDGNYLGRDDEFKSLITIKP
GEPYNGEQVTETTKAFSDYFGTFGYAFARVQARPDIDRVNNRVTLTLQAEPSRRVYVRRV
SVGGNNKTRDEVIRREFRQFEASWYDGDKIKVSRDRVDRLGFFTEVNVETQEVPGSPDQV
DLTVNVAEKPTGTLQLGAGYSSAEKVALTFGISQENVFGSGNFLGVQVNTSKYNRTLSLT
TTDPYFTKDGISRTISVYHTTTRPYSTNEDGDYKLVNQGASIRFGVPFSELDTVFFGVGL
ERYAFDPNRSALAGLTTPQSYLNYFHCGKDATGWFVTSCDQKSVWGIPLTVGWGRDSRDS
ALVPTTGRLQRANLELGVGGDMKYLKTSYQYQQFFAINKQYTFAINGEVGYAKAFGGKVY
PIFKNFYAGGLGSIRGFEQNSLGPRDQPLLGQTEGAALGGTKKAIFNAELSTPFPGAGND
RTLRLYGFFDVGNVFGSRAPNVTDEQWKAQKKLRASVGLGISWISPLGPLRLAYAFPVKS
QKEVTDPSTGFVVIPKDRIQRLQFQIGTSF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaacttcagtcgctttcgcctgcgtagcgttgccgcggtggtggccagcacg
ctggcggccacggccgcttgggccgtcgagcctttcacggtgcgcgatatccgcgtcgaa
ggcttgcaacgcgtcgaggccggcacgatcttcgggtcgctgcccctgcgtgtgggcgac
acctacagcgacgaacgcggctcggccgcgatccgcgcgctgttcgacctggggttgttc
aaggacgtgcgcatcgacgtcaacggcaacgtgctggtggtgatcgtcgaagagcggccc
accatcgccgacgtcgacttcgtcggcgccaaggaattcgacaaggcggcgctgcagaag
gcgctgcgtgaaatcgggctggccgacggccgcccgtacgacaaggccctggccgaccgc
gcggagcaggagctcaagcgccagtacgtgagccgcagcctctacaacgcgaacgtcgtg
accaccgtcacgcccatcgagcgcaaccgcgtgaacctgacgttcaccgtgaccgaaggc
gaatccgcccgcatccgcgaagtgcacgtggtcggcaacaaggccttcagcgaatcgacg
ctgctgagcctgttcgaccaggacagcggcggcttcatgagctggtacaccaagtcgaac
cagtactcgcgcgccaagctcaacgccgacctcgagacgctgaagagctactacatcacc
cgcggctacctcgagttccgcatcgattcgacccaggtcgccatttcgccggaccgcaag
gacctgagcgtcacggtgaacatcaccgaaggcgagaagttcgtggtggcgggcatcaag
ctcgacggcaactacctgggccgcgacgacgagttcaagtcgctcatcacgatcaagccc
ggcgagccctacaacggcgagcaggtcaccgagaccaccaaggccttcagcgactacttc
ggcaccttcggctacgccttcgcccgcgtgcaggcgcgtccggacatcgaccgcgtgaac
aaccgcgtcacgctcacgctgcaggccgagccttcgcgccgcgtgtacgtgcgccgcgtg
tcggtcggcggcaacaacaagacgcgcgacgaagtgatccgccgcgagttccgccagttc
gaagcctcgtggtacgacggcgacaagatcaaggtttcgcgcgaccgcgtggaccgcctg
ggcttcttcaccgaagtgaacgtcgagacccaggaagtaccgggctcgcccgaccaagtc
gatctgaccgtcaacgtggccgaaaagcccaccggcacgctgcagctgggcgccggctac
tcgagcgcggaaaaggtcgcgctgaccttcggcatctcgcaggagaacgtattcggctcg
ggcaacttcctgggcgtgcaggtcaacaccagcaagtacaaccgcacgctgtcgctgacc
accaccgacccgtacttcacgaaggacggcatctcgcgcacgatcagcgtctaccacacg
acgacgcgcccgtactccacgaacgaagacggcgactacaagctggtgaaccagggcgcc
tcgatccgtttcggcgtgccgttcagcgaactcgacaccgtcttcttcggcgtcggcctg
gagcgctacgcgttcgacccgaaccgctcggcgctcgccggcctcaccacgccgcagtcg
tacctcaactacttccactgcggcaaggacgcgaccggctggttcgtcaccagctgcgac
cagaagagcgtctggggcatcccgctgaccgtgggctgggggcgcgacagccgcgacagc
gcgctggtcccgaccaccggccgtctgcagcgcgccaacctcgagttgggcgtgggcggc
gacatgaagtacctgaagaccagctaccagtaccagcagttcttcgcgatcaacaagcag
tacaccttcgccatcaacggcgaagtgggttatgccaaggccttcggtggcaaggtctac
ccgatcttcaagaacttctacgccggtggcctgggttcgatccgcggtttcgagcagaac
tcgctgggcccgcgcgaccagccgctgctcggccagaccgaaggcgccgcactgggcggt
accaagaaggccatcttcaatgccgagctgagcacgccgttccccggcgccggcaacgac
cgcacgctgcgcctgtacggcttcttcgacgtcggcaacgtgttcggttcccgtgcaccc
aacgtgacggacgagcaatggaaggctcagaagaagctgcgcgcctcggtcggcctgggc
atcagctggatctcgccgctgggcccgctgcgcctggcctacgccttccccgtcaagtcc
cagaaggaagtgacggatccgagcaccgggttcgtcgtgatcccgaaggatagaattcag
cgcctccaattccagatcggaacgtctttctaa
DBGET
integrated database retrieval system
