Vibrio campbellii ATCC BAA-1116: M892_15230
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Entry
M892_15230 CDS
T02837
Name
(GenBank) polar flagellar protein FlaK (sigma-54 dependent transcriptional activator)
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca02020
Two-component system
vca02040
Flagellar assembly
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M892_15230
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M892_15230
09142 Cell motility
02040 Flagellar assembly
M892_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_15230
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vca02035
]
M892_15230
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
Other families
M892_15230
Bacterial motility proteins [BR:
vca02035
]
Flagellar system
Flagellar assembly proteins
Others
M892_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGU95603
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Position
I:3282419..3283885
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AA seq
488 aa
AA seq
DB search
MQGLAKLLVIDDDAPSRLNISNILEFVGESCEAVSSDQLGDVDWSAVWSGFIVGNISAGH
AATAVMAHLNEAYHIPLLVMGSFPLPVDDLPNFVGELEQPLNYPQLSEALSHCKDFLGRK
GVNVVASARKNTLFRSLLGQSRGIQEVRHLIEQVSGTEANVLILGESGTGKEVVARNIHY
HSAYRNGPFVPINCGAIPPELLESELFGHEKGAFTGALTSRKGRFELAEGGTIFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNTTIKVNVRVVAATHRDLETMIDDGTFREDLFYRLNV
FPIEMPALKARKQDIPLLLQELMTRLEAEGGQPICFTPRAINSLMEHNWPGNVRELANLV
ERMIILYPNSLVDVNHLPTKYRYSDIPEFQPEGNPFISVEEQERDVFQDIFSENFSFEDQ
SDLDHNMNAPQALPPEGVNLKELLADMEVNMISQALEAQGGVVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaagctgcttgtaatcgatgacgatgcaccaagtcgtttgaatata
agcaatatattggaatttgttggagaaagttgcgaagcggtcagttctgatcagctaggc
gatgttgactggtcagccgtttggtcaggcttcattgtcggtaacatctctgcgggtcat
gcagcgacagcggtgatggctcacctcaacgaagcgtaccatatcccacttctcgtcatg
ggctctttcccattgcccgttgatgatttgccaaactttgtcggtgaattagagcaaccg
ctcaactacccgcaacttagcgaagcgttaagtcactgcaaagacttccttggacgtaaa
ggcgtaaacgtggtagcaagcgcacgcaaaaacacgcttttccgtagccttttaggccaa
agccgaggcattcaagaagttcgtcatttgatcgaacaagtatcgggcacagaagcaaat
gtgctgatcttgggtgagtctggcacgggtaaagaagtcgtcgcacgtaacattcactac
cattctgcctatcgtaatggtccgtttgtgccaatcaactgtggcgcgatcccaccagag
cttctggaaagtgagctgtttggtcatgagaaaggagcgttcactggtgcgttgacctca
cgtaaaggccgttttgaactagccgaaggtggtacgatcttccttgatgagattggtgat
atgccaatgtcgatgcaagtgaagttgctgcgtgttctgcaggagcgttgttttgaacgc
gtaggtggcaacaccacgatcaaagtaaatgttcgtgttgttgccgcaacgcaccgcgat
ctagaaaccatgatcgacgacggcacgttccgtgaagaccttttctatcgcttgaatgtt
ttcccaattgagatgcctgcgctaaaagcgcgtaagcaagacatccctttgttactgcaa
gagctaatgacgcgtttggaagctgaaggcggacaaccaatttgcttcactcctcgtgcg
attaactcgctgatggaacacaactggccgggtaacgttcgtgaacttgccaaccttgtc
gagcgcatgatcattctctacccaaacagtttggttgatgtaaaccatctgccgacaaag
taccgttacagtgatattcctgagttccaaccagaaggtaacccgtttatttcggttgaa
gaacaagaacgtgacgtgttccaagatatcttctctgagaacttcagttttgaagatcaa
agcgatctggaccacaacatgaatgctcctcaagcgctaccgccagaaggtgtgaacttg
aaagagcttctagccgatatggaagtcaacatgatcagccaagcgttagaagcgcaaggt
ggtgtggtagcaagagctgcagatatgctagggatgcgacgcacaacactggttgaaaaa
atgcgtaagtacaaccttcaacgctag
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