KEGG   Vibrio cyclitrophicus: FAZ90_00230
Entry
FAZ90_00230       CDS       T06393                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc03420  Nucleotide excision repair
vcc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FAZ90_00230 (uvrD)
   03430 Mismatch repair
    FAZ90_00230 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcc03400]
    FAZ90_00230 (uvrD)
Enzymes [BR:vcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FAZ90_00230 (uvrD)
DNA repair and recombination proteins [BR:vcc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FAZ90_00230 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     FAZ90_00230 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_12 AAA_11 PhoH
Other DBs
NCBI-ProteinID: QCI69611
LinkDB
Position
1:47111..49285
AA seq 724 aa
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLQSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
IRLLRRLIKAQNLDEKQWPAKQASWWINGKKDEGLRPNHIDAYHDPITQTWLKIYSAYQE
ACDRAGLVDFAEILLRSHELLRDKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
DCRVMIVGDDDQSIYGWRGAKIENIQKFLDEFPGASTVRLEQNYRSTKTILQASNELISN
NTERMGKELWTDGNDGEPISVYSAYNELDEARFTVSKIKEWQEKGGALEDTAMLYRNNAQ
SRVLEEALIQGGLPYRIYGGMRFFERQEIRDALSYLRLMSNRSNDAAFERVVNTPTRGLG
DKTLETIRLAARDRGATMWEASVALIEEQVLPGRAAGALSRFIELINALEDDTIELRLHE
QTDHVIKSSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQTAVKENFNETGFSLGSRVKHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAR
LEQL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatagatccttcgcttttactcgatggcctaaacgacaaacaacgtgaggcggtcgcg
gcacctttagaaaacctacttattctggcaggtgctggtagtggtaaaacgcgagtgttg
gtgcatcgtattgcttggctgcaaagcgtagagcaagcatcaccgttctctattatgtcg
gttaccttcaccaacaaagcggcagcagagatgcgtggtcgtattgaagagctgatgatg
ggcagctcgtcaggcatgtggaacggcaccttccacggtatttgtcaccgtattcttcgt
gctcactacctagatgcaaaactgccagaagacttccagatcattgattcagatgatcag
attcgcttactacgtcgcttaatcaaggcgcaaaaccttgatgaaaagcagtggccagcc
aagcaagcttcttggtggatcaatggtaaaaaagatgaagggctgcgcccaaatcacatt
gacgcctaccatgatccaatcactcaaacgtggttaaagatttactctgcttaccaagag
gcatgtgatcgtgctggcttggtcgactttgctgagatcttgttgagatcgcatgaacta
ttgcgcgataagaaacacatccgcgaacactatcaagctcgctttaagcatattcttgtc
gacgaattccaagataccaacaacatccaatacgcttggctacgtatgatggcaggcccg
gattgtcgtgtgatgatcgtgggtgatgatgaccaatctatctatggctggcgcggcgcg
aaaatcgaaaatattcagaagttcttggatgaattcccaggcgcttcaacggttcgactc
gaacaaaactaccgttcaaccaaaaccattctgcaggcatcgaacgagcttatctcgaac
aacaccgagcgtatgggtaaagaattgtggaccgatggcaacgatggcgagccaatctca
gtttactcggcttataacgagttagatgaagcgcgtttcacagtcagcaaaatcaaagag
tggcaggagaaaggcggtgcgctagaagatactgcaatgctttatcgtaataatgcccag
tctcgtgttcttgaagaagctttgattcaaggtggtctaccttaccgaatctacggcggc
atgcgattcttcgagcgtcaggaaatcagagatgctttgagctacctgcgcttaatgagt
aaccgcagcaatgatgcggcgtttgaacgtgtcgtcaatacgccaacgcgtggcttgggc
gataaaacgctagaaacgattcgtcttgcagcgcgtgatcgtggtgcaaccatgtgggaa
gccagtgttgctctgatagaagaacaagtgttaccaggccgtgctgcaggtgctttgagc
cgctttattgagcttatcaatgcacttgaagatgacactatagaactgagacttcatgag
caaaccgaccacgtaatcaaatcgtcgggtttgtttgcgatgtacgagcaagagaaaggc
gaaaagtcgaaggcacgtattgagaacttggaagaattggtaacggcaacgcgtcagttt
gaaaagccagaagaagcggatgaaatgagcatgctaacggcgttcttaactcatgcggct
ttggaagcaggtgaaggtcaggctgacgagtttgatgatgcggttcagctcatgactctg
cacagtgccaaaggcctagagttcccaatggtattcatggttggcgttgaagagggtatg
ttcccaagccagatgtctgcagaagaggcagggcgcttagaagaagagcgtcgcctgtgt
tacgtaggcatgacgcgtgcgatggagaagctttacataacttacgcagagatgcgtcgc
ttgtacgggcaagacaagtaccacaaaccgtcacgctttattcgtgagctgcctgagaca
tgtctggatgaagtgcgtatgaaagcgcaagtgagccgtcctgcaagcagcggtcgcttt
agccaaaccgccgtgaaagagaactttaacgaaacaggctttagtttgggttctcgcgtt
aagcaccctaagtttggtgaaggcactatcatcaactttgagggaagtggcccacaaagc
cgagttcaagtcgcgtttaacggtgaagggattaagtggttagtaacggcttacgctcga
ctagagcagctttaa

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