Vibrio cyclitrophicus: FAZ90_00470
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Entry
FAZ90_00470 CDS
T06393
Name
(GenBank) HDOD domain-containing protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
FAZ90_00470
Enzymes [BR:
vcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
FAZ90_00470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HDOD
EAL
Motif
Other DBs
NCBI-ProteinID:
QCI69647
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All DBs
Position
1:102450..103670
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AA seq
406 aa
AA seq
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MTATYVARQPILNRNKNTLGYELLFRDGERNAYPAHIESNRATYRLIVENFLSVGLNPSI
SSSRCFINFPYQSLIRRLPLSLPKDKVVVEILETCKPTDELLDAVKELYQAGYMIALDDF
TSTPEWERFLRYTHIVKLDIMQMGLDEACDLVKAHQGKKFSFLAERVETEQEFKQAKEAG
FKFFQGYFFSKPQIIKTKYISPEQVIAMELFQEVCKPDVDFQRVESIVAKDVALSYKLLR
FVNTMSPRLEVTISSFRQALVYLGQEKLKMFVSLAVASYVSDKKPKELYGLSLQRAQFCQ
RMSRYQAFAGHTEQAFMIGLFSLLDALLDLSLENLVEQLPLCKSIKVALLRREGPYGTLL
ALEESFEHADWQQIDEHCADLGLNVEQVKTELTEARRWSHTVTNQL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctacgtacgttgctcgacaacctatcttaaatcgtaacaagaacacgctcggt
tatgagctgttgtttcgcgatggagagaggaatgcctatccagcgcatattgagtctaat
cgagcaacgtatcgtctgattgttgaaaactttttgtcggtagggcttaacccttcgatc
tcatcttcgcgctgctttatcaatttcccataccaaagcctgattcgtcgacttccttta
agtttaccgaaagacaaggtggtggtagagatcctcgagacctgtaaaccaaccgatgag
ttattagatgcggtaaaagagctttaccaagctggctacatgattgctcttgatgatttt
acatcgacgcctgaatgggaacgcttcctgagatatacgcacatcgttaagctcgacatc
atgcaaatgggtttggatgaggcgtgtgatttggttaaagcccatcaagggaagaagttt
agctttcttgctgaacgcgttgaaaccgaacaagaattcaagcaagcgaaagaggccggt
tttaagttcttccaaggctacttctttagtaaaccgcaaatcatcaagaccaagtatatt
agcccagagcaagtgattgccatggagttatttcaagaggtgtgtaaaccggacgtcgac
ttccaacgtgttgaaagcattgtcgcgaaagatgtcgctttatcttataagttactgcgg
tttgtaaacaccatgtcgcctcgtcttgaggtgactatttcttcgttccgtcaggcctta
gtgtatctagggcaagagaaactgaaaatgtttgtctcgttggcggtggcatcttatgtc
tctgataaaaaaccaaaagagttgtatggcctgtctttacagcgtgctcaattttgccag
cgcatgtctcgttaccaggcatttgcagggcacactgagcaggcgtttatgattggtttg
ttttcattgcttgatgcgctgcttgatctgtcgttagagaatctcgtagagcagttgccg
ttgtgtaaaagtatcaaggttgctttgcttcgaagagaagggccatacgggactctactg
gcacttgaagagagttttgagcatgcagattggcaacaaattgatgagcattgcgctgat
ctaggacttaatgtcgagcaagtaaaaacagagcttaccgaagcgcgacgctggagccat
accgttactaaccagctttga
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