KEGG   Vibrio cyclitrophicus: FAZ90_03050
Entry
FAZ90_03050       CDS       T06393                                 
Name
(GenBank) porin
  KO
K08720  outer membrane protein OmpU
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc01501  beta-Lactam resistance
vcc05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    FAZ90_03050
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FAZ90_03050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vcc02000]
    FAZ90_03050
Transporters [BR:vcc02000]
 Other transporters
  Pores ion channels [TC:1]
   FAZ90_03050
SSDB
Motif
Pfam: Porin_4 Porin_1
Other DBs
NCBI-ProteinID: QCI70084
LinkDB
Position
1:complement(616466..617518)
AA seq 350 aa
MNKTMIALAVSAAALATNAVAADGKQAGGIDGTSVYSSNGTSLEIGGRAEARLSLKDGKA
EDKTRVRLNFLGKVEIQDGLYGVGFYEGEFTTAENGGSTDNNDGDITNRYTYAGIGGDFG
EVTYGKNDGALGVITDFTDIMSYHGNSAAMKIAVADRSDNMVSYKGQFQDLGVKASYRFA
DRQEGVVNGCNIGEYCDNDADGYSLSGIYAIGDSGFKLGAGYADQADQNEYMLAASFRTE
ALYFAGTFTDGELAKKDGDYTGYEFATAYTLDKTAFTLTYNNAETDGDTSADNVAIDATY
YFKPNFRTYISYNFNLISEGDKFGNADGVNFGATKVQAEDELALGLRYDF
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaacaagactatgatcgcgcttgctgtatctgctgcagctcttgctactaacgctgta
gcagccgacggtaaacaagctggtggtattgacggtacttctgtatacagctcaaacggc
acttctctagagatcggtggtcgtgcggaagctcgtctatctctaaaagatggcaaagct
gaagacaaaactcgtgtacgtcttaacttcctaggtaaagttgaaatccaagacggccta
tacggtgttggtttctacgaaggcgaattcacaacggctgaaaacggcggttctactgat
aacaacgacggcgacatcactaaccgttacacatacgctggtatcggcggtgacttcggt
gaagttacttacggtaaaaacgacggtgcgctaggcgtaatcacagacttcacggatatc
atgtcttaccacggtaactctgctgcaatgaaaattgctgtagcagatcgttcagacaac
atggtttcatacaaaggtcaattccaagacctaggcgtaaaagcaagctaccgttttgct
gaccgtcaagaaggtgttgttaatggttgtaacatcggtgagtactgtgacaacgacgct
gatggctactctctatctggtatctacgctatcggcgactctggctttaagctaggtgct
ggttacgcagaccaagctgaccaaaacgaatacatgctagcagcttctttccgtactgaa
gcgctatactttgctggtacgttcacagatggtgaactagcgaagaaagacggtgactac
acaggttacgaattcgcaactgcttacacgctagataagactgcattcacgctaacgtac
aacaacgcagaaacagatggtgatacatctgctgacaacgttgcaatcgatgctacttac
tacttcaagcctaacttccgtacgtacatttcgtacaacttcaaccttatctctgaaggt
gacaagttcggtaatgctgacggtgtaaactttggcgcaactaaagtacaagctgaagac
gagctagctctaggtctacgttacgacttctaa

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