Vibrio cyclitrophicus: FAZ90_03050
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Entry
FAZ90_03050 CDS
T06393
Name
(GenBank) porin
KO
K08720
outer membrane protein OmpU
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc01501
beta-Lactam resistance
vcc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
FAZ90_03050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAZ90_03050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_03050
Transporters [BR:
vcc02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ90_03050
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GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
QCI70084
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All DBs
Position
1:complement(616466..617518)
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AA seq
350 aa
AA seq
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MNKTMIALAVSAAALATNAVAADGKQAGGIDGTSVYSSNGTSLEIGGRAEARLSLKDGKA
EDKTRVRLNFLGKVEIQDGLYGVGFYEGEFTTAENGGSTDNNDGDITNRYTYAGIGGDFG
EVTYGKNDGALGVITDFTDIMSYHGNSAAMKIAVADRSDNMVSYKGQFQDLGVKASYRFA
DRQEGVVNGCNIGEYCDNDADGYSLSGIYAIGDSGFKLGAGYADQADQNEYMLAASFRTE
ALYFAGTFTDGELAKKDGDYTGYEFATAYTLDKTAFTLTYNNAETDGDTSADNVAIDATY
YFKPNFRTYISYNFNLISEGDKFGNADGVNFGATKVQAEDELALGLRYDF
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactatgatcgcgcttgctgtatctgctgcagctcttgctactaacgctgta
gcagccgacggtaaacaagctggtggtattgacggtacttctgtatacagctcaaacggc
acttctctagagatcggtggtcgtgcggaagctcgtctatctctaaaagatggcaaagct
gaagacaaaactcgtgtacgtcttaacttcctaggtaaagttgaaatccaagacggccta
tacggtgttggtttctacgaaggcgaattcacaacggctgaaaacggcggttctactgat
aacaacgacggcgacatcactaaccgttacacatacgctggtatcggcggtgacttcggt
gaagttacttacggtaaaaacgacggtgcgctaggcgtaatcacagacttcacggatatc
atgtcttaccacggtaactctgctgcaatgaaaattgctgtagcagatcgttcagacaac
atggtttcatacaaaggtcaattccaagacctaggcgtaaaagcaagctaccgttttgct
gaccgtcaagaaggtgttgttaatggttgtaacatcggtgagtactgtgacaacgacgct
gatggctactctctatctggtatctacgctatcggcgactctggctttaagctaggtgct
ggttacgcagaccaagctgaccaaaacgaatacatgctagcagcttctttccgtactgaa
gcgctatactttgctggtacgttcacagatggtgaactagcgaagaaagacggtgactac
acaggttacgaattcgcaactgcttacacgctagataagactgcattcacgctaacgtac
aacaacgcagaaacagatggtgatacatctgctgacaacgttgcaatcgatgctacttac
tacttcaagcctaacttccgtacgtacatttcgtacaacttcaaccttatctctgaaggt
gacaagttcggtaatgctgacggtgtaaactttggcgcaactaaagtacaagctgaagac
gagctagctctaggtctacgttacgacttctaa
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