Vibrio cyclitrophicus: FAZ90_05520
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Entry
FAZ90_05520 CDS
T06393
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FAZ90_05520 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcc01007
]
FAZ90_05520 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcc03016
]
FAZ90_05520 (aspS)
03029 Mitochondrial biogenesis [BR:
vcc03029
]
FAZ90_05520 (aspS)
Enzymes [BR:
vcc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FAZ90_05520 (aspS)
Amino acid related enzymes [BR:
vcc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FAZ90_05520 (aspS)
Transfer RNA biogenesis [BR:
vcc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FAZ90_05520 (aspS)
Prokaryotic type
Other AARSs
FAZ90_05520 (aspS)
Mitochondrial biogenesis [BR:
vcc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FAZ90_05520 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QCI70553
LinkDB
All DBs
Position
1:1166186..1167958
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AA seq
590 aa
AA seq
DB search
MRTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFPIA
NQLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDFNQTNSEEQ
RLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMT
SQEVRNVTEKLVHDMWKELLDVELGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVK
DVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKVNDRAAG
MEGIQSPVAKFLNEDVINGILERTEAESGDIILFGADKANIVAEAMGALRIKLGDDLELT
DKKAWAPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGVNAEELKANPAAANSDAYDMVING
YEVGGGSVRIHNAEMQTAVFGILGIEAQEQQEKFGFLLEALKYGTPPHAGLAFGLDRLAM
LLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVNLAKKED
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccattactgtggtaacctgaacaagtccctggcgggacaaactgtagaattg
tgcggctgggtaaaccgtcgccgtgatttaggcggtcttatctttattgatatgcgtgat
cgtgaaggcatcgttcaggttgttgtcgatccagatatgaaagatatcttcccgatcgct
aaccaactgcgtaatgaattctgtatcaaatttactggtgaagtacgtgttcgtcctgac
agccaagtaaataaagacatggctactggtgaagtagagctttacgcgacaggcctagag
atcatcaaccgttcagaagcgcttccactagacttcaaccaaacgaactctgaagagcaa
cgtcttaagtaccgttacatcgatcttcgtcgcccagaaatgagcgaccgtatcaagctt
cgtgcacgtgcttctagcttcgttcgtcgtttcctcgatgagaacctattcctagacatc
gaaacgccagtactaacgaaagcgactccagaaggtgctcgtgactacctagtaccaagc
cgtgttcacaaaggtagcttctacgcacttcctcaatctcctcagctattcaagcaactg
ctgatgatgtctggttttgatcgttactaccaaatcgttaaatgtttccgtgatgaagat
ttacgtgctgaccgtcagcctgaatttactcagatcgatatcgaaacatcgttcatgact
tctcaagaagtacgtaacgtgactgagaagcttgttcacgatatgtggaaagaacttcta
gatgttgaactaggccaattcccagtaatgcctttctctgaagcgattcgtcgtttcggt
tctgataagccagatctacgtaacccactagagctagttgacgttgctgacttggttaaa
gacgttgagttcaaagtattctctggcccagctaacgacgaaaaaggtcgcgtagcggtt
atccgtgttccgggcggtgctaagctaactcgtaagcaaatcgacggttacgctgaacac
gtaaacatctacggcgcgaaaggcttagcttggatgaaggttaacgatcgtgctgcaggc
atggaaggtatccaatctccagttgctaagttcctaaacgaagatgtgatcaacggcatt
cttgagcgtacagaagctgagtctggcgacatcattctattcggcgcagacaaagcaaac
attgttgcagaagcaatgggcgcacttcgtattaaactaggcgatgatctagagctaact
gacaagaaagcgtgggctcctctttgggttatcgatttcccaatgttcgaagaagatggc
gaaggcaacctgcacgcaatgcaccacccattcacatcaccacttggtgtgaacgcggaa
gagctaaaagcgaacccagcagcagctaattctgatgcatacgatatggtaatcaacggc
tacgaagtgggcggcggttcggtacgtatccacaacgcagaaatgcaaacggctgtattc
ggtatcctaggtatcgaagcacaagagcaacaagagaagttcggctttctgcttgaagct
cttaagtacggtacgccaccacatgctggtctagcattcggccttgaccgtttagcaatg
cttctttgtggtacagagaacatccgtgacgttatcgcattcccgaaaacaacagcagca
gcatgtctattaacagacgcgccaagcctagcaaacccagcatcactggaagagctagca
atcgctgttaacttggctaagaaagaagactaa
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