Vibrio cyclitrophicus: FAZ90_13680
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Entry
FAZ90_13680 CDS
T06393
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcc03019
]
FAZ90_13680
03009 Ribosome biogenesis [BR:
vcc03009
]
FAZ90_13680
Messenger RNA biogenesis [BR:
vcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FAZ90_13680
Ribosome biogenesis [BR:
vcc03009
]
Eukaryotic type
Pre-60S particles
RNases
FAZ90_13680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QCI72033
LinkDB
All DBs
Position
1:complement(3020590..3021135)
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AA seq
181 aa
AA seq
DB search
MSFSDQNLIWVDLEMTGLDPETHKIIEIATIVTDSELNILAEGPVLAIHQPQSELDKMDE
WCTTTHTGSGLVKRIQESTVSEQDAIQQTIEFLEKWVPKGKSPICGNSIGQDRRFLYKHM
PELEEYFHYRYVDVSTLKELTRRWKPEVLDGFSKSGSHLALDDIRESIAELQYYRKTIIN
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttagcgatcagaacctgatttgggttgatctagagatgactggacttgatcct
gaaactcacaaaatcattgaaattgcgactatcgttaccgatagtgagcttaacatcctg
gctgaaggacctgttttggctattcaccaacctcagagtgaattggacaagatggacgag
tggtgcacaacgactcataccggcagtggcctagttaagcgaattcaagaaagcacggtt
tcagagcaagatgcgattcaacaaaccattgagtttcttgagaaatgggtaccaaaaggt
aagtcaccgatttgtggtaacagcattggtcaagaccgccgtttcctatacaaacacatg
cctgagttggaagagtacttccactaccgctatgttgacgtaagcactttgaaagagttg
actcgccgttggaaacctgaagtgttagatgggttttctaagtcgggaagccaccttgca
ttagacgatattcgtgagtcgattgctgagctgcagtactaccgaaaaacgattattaac
atctaa
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