Vibrio cholerae O1 2010EL-1786: Vch1786_I0002
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Entry
Vch1786_I0002 CDS
T01650
Symbol
pcnB
Name
(GenBank) polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vch1786_I0002 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vce03019
]
Vch1786_I0002 (pcnB)
Enzymes [BR:
vce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Vch1786_I0002 (pcnB)
Messenger RNA biogenesis [BR:
vce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Vch1786_I0002 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AET25619
LinkDB
All DBs
Position
1:complement(536..1909)
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AA seq
457 aa
AA seq
DB search
MNNNDFEPSNTRTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVR
DLLLGGKPKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQES
SQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDR
LVRLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEES
LKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDL
RINPAFMFAAMLWYPMIDLADRLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTV
RDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGR
NMRQAMVGDIGNATGSSKSGARRRKPSRNKSKSKSSE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacgattttgaaccgagcaacactcgcacatatccagacttagctttgacc
atcattccgcgtcaggaacaccctatctcgcgtcagcagatcagcgaaaatgcgctgaaa
gtgctctatcgtctgcatggtgcggggtttgaggcctttctggtcggcggcggtgtgcgt
gatttacttctgggtggcaagccgaaagactttgatgtggccaccaacgcaacccccgag
cagttacgccaactgtttcgcaactgccgtctgattggtcgccgtttccgtctcgcgcac
attatgtttggacgcgacatcgtcgaagtcgccactttccgtggccatcatcaagagtcg
agtcagagccaaaatatcgctgcacaatccgaagcgggtatgctgctacgtgataacgtg
tacggcacgattgatgaagatgccgagcgccgcgatttcaccatcaatgccatgtattac
aacattgcagactacagcatccacgactatgccggcggcatggaagatctggaagatcgt
ttggtgcgcctgattggcgatccggaaacgcgttatcgtgaagatccggtacgcatgctg
cgcgcggtacgttttgcggtcaaactcgattttgatatcgaagaagataccgcggcgccg
attgagcaacttgcgccattgctgcgtgacatccctgcggctcgtctctacgaagaatcg
ctcaaaatgctgcaagcgggtcatggtttagaaacctaccacttaatgcgtcaatacaat
ctgttccagcaacttttcccaactatagccgagcattttactgccgatcacagctcaaaa
actgagcagatgttggatttggtgctggatgcgaccgacattcgggttgaagaagatctg
cgcatcaatccggcctttatgtttgccgccatgctgtggtatccgatgattgatctcgcg
gatcgcttaatggaatcgctcgatctcaatgagtttgatgccattaccgaagccagcaac
cgcatcttagatgaagtggtcaagcgtatcgctattccgcgccgccacaccactacagtt
cgtgatatttggcagttgcaacagcgcttaccccgtcgcagtggtaaaagggccttccgt
ctacttgaactgaacaagttccgtgcaggctttgatttcctcgaaatgcgtggcgaaatt
gaaggcggtgaaaccaaacaattagcggaatggtgggccaccttccaaagcgcgggacgc
aatatgcgccaagccatggtgggtgatatcggtaatgcaacgggcagcagcaaatctggc
gctcgccgccgtaaaccatcccgcaacaaatccaagagtaaatccagcgaatga
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