Vibrio cholerae O1 El Tor FJ147: IR04_11215
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Entry
IR04_11215 CDS
T03827
Name
(GenBank) amino acid ABC transporter permease
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_11215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_11215
Transporters [BR:
vcf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IR04_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_membrane
RsgA_GTPase
ATP-synt_ab
Zeta_toxin
AAA_29
DUF87
nSTAND3
AAA_23
NTPase_1
MMR_HSR1
NACHT
AAA_16
HrpJ
DEAD
AAA_22
TsaE
FtsK_SpoIIIE
AAA_7
T2SSE
AAA_30
KAP_NTPase
PspB
Motif
Other DBs
NCBI-ProteinID:
AJZ99697
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Position
I:complement(1335274..1336995)
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AA seq
573 aa
AA seq
DB search
MRDLLPYLKLYKKHWFGLTLGMLLALLTVLASIGLLTLSGWFLSAAAVAGLSIARETFNY
MLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADM
LNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPT
LFYRLGKKNGQHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQYV
NAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFATMASVELLMPIAGA
FQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFT
LTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVS
QRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQDAALNTWLGEGGRQLSGGEK
RRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMD
AIALIEQGQLVEYGHHHTLLAQHGRYHKLTQKL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacctgctgccttacctaaaactgtataaaaaacactggttcggtcttaccctt
ggcatgctgctggcgctgctgaccgttctcgcttcgattggactgctgacgttatccggc
tggtttttgtctgcggcggcagtggccggactcagtattgcccgagaaacctttaactac
atgctacccggcgcctttgtgcgcggttttgccatgggacgcactgcaggtcgttggggc
gagcgtgtcgttactcacaacgccaccttcaagctgctcactgatttgcgagtgtttttc
tttgagaaactgacaccgcttatcccgggacgtctgagcgcggtgcgcgatgccgatatg
ctcaaccgcatcgtggctgatgtggatgccatggaccatgtatatttacgtttaatcaac
ccagtcacggtcggtgtgctgggtattgcggctctcaccacactgattgcttggtttgat
ccgcagcttggcatgaccttaggtgccatcttgctactggttctgctggtgtggcccacg
cttttttaccgcttggggaaaaagaatggtcaacacttaacgcagaataaagcggaattg
cgcgttcgcacgctagattggttacaaggttacagtgaactaaccattttcggcgcagaa
caaacctatcgtcaggcaatcttaacggcgcaagacaaactgcttcgtaaccaatacgtt
aacgcacaagtctcaggactggctcaatcgttactgttgcttgccaatggttggacactg
gtactgatgatctggctggccgccgatggcgtgggtgggcaaactccggatccgctgatt
gcactggtggcttttgcaaccatggccagcgtcgagttattgatgcctattgccggcgca
ttccagcatttggggcagactctcacctcggctcgccgcttaaatgagatcattctagcc
aaacctgaggtcgagtttaccgcgcaaccaaccgcgcataatggccaatacaacattgaa
ttcaacggcgtccactttgcttaccaagcgaataaacccaaggccattgatgactttact
ttgactctcgctcaaggtcagaaagtggcgattgtcggccaaactggctcagggaaatcg
accttaattcaactcctttgccgttattgggatgtacagcagggtcagatcacgattggt
ggaacagacattcgagaatggcgagagagcgatcttcgtgccgccatcagcgtggtgagt
caacgggtggatattctcaatggcacgctgcgcgataacctgaaactggcgaaaccggac
gcaaccgatgaagcgctcagtgatattctgcaacaagtcggtctagagaaattgctacaa
gatgccgcgctcaatacttggcttggcgaaggtggccgtcagttatccggtggagaaaaa
cgtaggctcggcattgcgcgagccctactgcataacgctccaatcctactgcttgatgaa
ccgaccgaagggttggacaagcaaaccgagcagcagatcatgcaactgttgcattgtcat
ttcggtcacaaaaccgtgctgtttatcactcatcgtctggtcaaccttgaacagatggat
gcgattgcgctgattgaacagggccagttggtagaatatggtcatcaccatactctcctc
gcccagcacggtcgttatcacaagctgacacaaaagctgtaa
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