Vibrio cholerae O1 El Tor N16961: VC_2678
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Entry
VC_2678 CDS
T00034
Name
(GenBank) primosomal protein N`
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC_2678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_2678
Enzymes [BR:
vch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC_2678
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC_2678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
AAA_19
TrwB_AAD_bind
PIF1
AAA_22
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AAF95819
UniProt:
Q9KNQ3
LinkDB
All DBs
Position
I:complement(2845351..2847555)
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AA seq
734 aa
AA seq
DB search
MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ
LKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWR
LTALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEE
RKPVARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLIT
PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI
VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP
ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN
QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC
GSTQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT
QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET
LRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLAS
KVRWSIDIDPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctccattgcccgagtttgcctacctgtacctctggataagtctttcgactat
ctgatcccagctcatctatttccagtgctgggcggtcgtgtgcaagtgccttttgggcga
caaaccttggtcggtattgtccagtcgctgacacatcaatccgattttcctatcgaacaa
ctgaaatccgtgcaagccgttttggatgacgcgcccgtgtggccagataaactgcagtct
ctgctgcactggtgtagccagttttatcattatccgctcggtgaaacgtacgcgaatgcc
ttgcccggcgcactgcgcaaaggcaaagcggcagagctgactagccataaagagtggcgt
ttgaccgcgcttggtcaagagcaactgatgcaaggggtgaagcgtggcgcggtaaaacaa
gcgcaagttctccatttgttgcagcacggcgctttatcgcaccaaactttgcttgatgaa
gaggtgagcagcacgaccctcaaagccttggtcgaaaaagggtggattgagtgtgaagag
cgtaaacctgtggcgcgtccttggccgcaagagctggaagctaaagtcgataaacctagg
cttaatcaagagcaggcgatcgcgattgcggcggtgaatagccagcaaggtttcggctgc
tttttattagaaggggtaacgggctcaggcaaaacagaggtgtatcttaacctcatcaca
ccggtattggcgcgtggtgaacaagccttggtgttggtgccggaaattggtttaacccca
caaaccatcaaccggtttcgccaacgttttaatgtccccgtcgaagtcatgcactcggcg
ctcaacgatactgaacgcctcaacgcttggctggcggcgcgcgataaagtggcggggatt
gtgattggtacgcgctcggcgctgctcacaccctttgccaaattgggcattattattgtt
gatgaagaacatgatagttcttacaagcagcaagatagcctgcgttatcacgcccgcgat
gtggctgtgatgcgcgcgcatctggagaatattccgattgtgcttggctcggcgacgcca
gccttggaaacgttgcataatgcgctcagtggtaaataccatcacttgcaactgacgcag
cgtgctggtaatgcactacccacacgtaaccacgcgttggatgtgaaagggctctatctg
gaaagtggtctgtctgcgcctttgattgcggaaatgcgccgccatttgtcggcgggcaat
caggtgatgctgtttttaaaccgccgcggtttttctccggccttgatgtgccatgaatgc
ggctggattgcggagtgccagcgctgtgatgcctattacacctaccatcaacacagcaat
gagatgcgctgccaccattgtggttcacagcgtcctgttctccatcaatgcaaagggtgc
ggctcgactcaactggttactgtcggcgttggtacggaacagcttgaagcgcaattacac
actctattccctgagtatcgttcagtgcggattgatcgagatagcacgcggcgtaaaggc
agtttggaatcggcgttaaccgcgattcgcaaaggcgaatatcagattttgattggtacg
caaatgctcgccaaaggacatcacttccccgatgttaccttggtcgcgttgttggatgtc
gatggctcattgtacagcagtgattttcgcgcttctgagcgtttggctcagctctttatt
caagtcgcagggcgggcagggcgtgccagcaagccgggcgaagtggtgctacaaacgcat
catcccgaacacagtttgctacaagccttgctgcataaggattaccaccattttgccctg
acggcgttggaagagcgtaagctggcgcagttgcccccttattctttcttgagcttattt
cgagctgaagccaatcacaccgctcaagtggaagattttttgcgtcaagtgcgcgaaacc
ttgcgctgcaatccttggtttgatagcgaatgtatggtgctcgggccaacgcctgcgcca
ctcgcgaaacgagcgggaaaattccgttggcagcttttactacaaacgccgaatcgcacc
ctgatgcagaagattttgcaaagcgcacgtccagcactgcaacaattaccgctggcgagc
aaggtgcgctggtcgatcgatattgatccgcaagatttgagctaa
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