Vibrio cholerae O1 IEC224: O3Y_11995
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Entry
O3Y_11995 CDS
T01766
Name
(GenBank) ribosomal large subunit pseudouridine synthase A
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
vci
Vibrio cholerae O1 IEC224
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vci03009
]
O3Y_11995
03016 Transfer RNA biogenesis [BR:
vci03016
]
O3Y_11995
Enzymes [BR:
vci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
O3Y_11995
5.4.99.29 23S rRNA pseudouridine746 synthase
O3Y_11995
Ribosome biogenesis [BR:
vci03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
O3Y_11995
Transfer RNA biogenesis [BR:
vci03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
O3Y_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFC59269
LinkDB
All DBs
Position
I:complement(2738954..2739691)
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AA seq
245 aa
AA seq
DB search
MAMTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVV
HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWP
NRPKQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLY
APPEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDFYPEAEEQILQHFDPERKLPDYK
KLSQD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaccgagtacaatccgcctaaggatccgtggattgatgtgatttatgaggat
gaacacatcatcgcagccaacaagccttctggtttgttatctgttcctgggcgacctgtt
gagcactacgacagtatgtgggctcgtttggtggattactgccctgatgtgaaggtcgtc
caccgtttggatatgtcgacttctgggctgatcctgtttgcgaaaggcaaacatatggaa
tcggcgttgaagaagcagttccagtatcgtctcactcataaaatctactatgcccgcgta
tggggtgtgatggagcaaaatgaaggcgaagtgaatttgccgctgtgttgtgattggcca
aaccgcccgaaacagaaagtctgttttgaagagggacgtgattctctgacccgctatcaa
gtcgtcaagcgtgaagagaaaaccacagtggtacgccttatcccgatcactggacgctct
catcagctgcgtgtgcacatgcaatcgctcggtcatccgattgtcggtgatgatctttac
gcgccaccagaagccgtcgagtttgccgatcgtctgcaactgcacgctgcggagctctgt
ttctaccatccacgtagtcattggctgcgcactttatttgtcccttgtgacttctatccc
gaagccgaggagcagattttgcagcatttcgatcctgagcgaaaattaccggactataaa
aagctatcccaagactaa
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