Vibrio cholerae O1 MJ-1236: VCD_000177
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Entry
VCD_000177 CDS
T00903
Name
(GenBank) ATP-dependent RNA helicase
Organism
vcj
Vibrio cholerae O1 MJ-1236
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SecA_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ACQ62145
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Position
2:complement(204859..206217)
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AA seq
452 aa
AA seq
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MESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFV
LPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQ
VKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAK
HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEAL
LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV
FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE
SFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAPRDK
SFYQNVAVGDSVFIPKKKVAPKPEVDLEDDID
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagagtactttgcaattcaaagatttaggcttagataatcgcttattgaaaaatcta
gcgcattacaatttcaaacaagcgactgagatccaacaacaggcgataccgctcactatt
gcgggacgtgatttgttggcctcatctaagacaggttcgggcaaaacgttggcattcgtg
ctgcctatgctgcataaatctttaaaaaccaaagccttttcagctaaagatccacgtggc
ttgattttggttccaacccgtgagttggcaaagcaggtgtatggtgagctgcgctccatg
ttgggtggtttaagttatacggcaaccttgatcacgggtggtgaaaactttaatgaccaa
gtgaaagcgttagcgcgtggacctcgctttattgtcgcgacacccggacgtttagccgat
catcttgaccaccgttcactctttttggaaggcctagaaacgctagtgctggatgaagcg
gatcgtatgttggatttaggctttgccaaagagctgcgccgtatccataacgcggcaaag
caccgtcgtcgccaaaccttgatgttctctgccacattagatcatgctgatgtgaatgat
atggcgatggagctgcttaatgaaccgaaacgtatcgcgatcggggtgggtagcgaagag
cacaaagacattactcagcatttctacttgtgtgaccatctagatcacaaggaagcgctg
cttgatcgtattttggccgatgctgagtaccgtcaagtgatcatctttacagcaacgcgt
gccgataccgatcgcctgactgagaagctcaatcaaaacaacctcaaagcagttgcgctc
agtggtaacctcaatcaaacgcagcgtaacaccatcatggggcaatttgagcgtgcggta
tttaagattcttgtgacgacggatgttgcttcacgtggccttgatattcccgcggtgact
cacgtgatcaactttgatatgccaaagcataccgaagagtatgttcaccgtgttggtcgt
actggtcgtgccggaaataaaggggatgccatgtctcttgttgggccaaaggactgggag
agttttaagcgagtggaagcttttttacagcaagagatccaatttgaggttttagctggt
ttagaaggtaagtttaaagggttgaaaccgcgtcaagcgaagcctaaagccgcgccaact
cagcgggtcaacaaagcgaaagcgccaagcaaatcgaaaaaagcggcgccgcgtgacaag
agcttctaccaaaatgtggcggtgggtgactcggtctttatcccgaaaaagaaagtcgcg
cctaagccagaagtggatctggaagacgacatcgactaa
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