KEGG   Vibrio cholerae O1 MJ-1236: VCD_003130
Entry
VCD_003130        CDS       T00903                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VCD_003130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcj03400]
    VCD_003130
DNA repair and recombination proteins [BR:vcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VCD_003130
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR GIY-YIG HHH HHH_2 HHH_3
Other DBs
NCBI-ProteinID: ACQ61290
LinkDB
Position
1:complement(2370749..2372515)
AA seq 588 aa
MYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKIDVTVTHTETEALILEH
NYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRGAKKRRGEYFGPYPDSGAVRETL
HLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGYQEIVHYLRLFLQGK
DNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDDSLEDLDVLGFAQEN
GIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSHSEARSIPARIILNR
GLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAITTKMNHKMTISQRF
KALQEELGMDAITRMECFDISHTMGESTMASCVVFNQEGPLKQEYRRYNITGITGGDDYA
AMAQVLERRYSKQLDSSKIPDIIFIDGGKGQLNRAYEIISSCWQDWPKYPKIIGIAKGVT
RKPGLETLITIDGDEFHLPSDAPALHLIQHIRDESHNHAIAGHRAQRGKTRRTSTLEGIE
GVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISHALAENIYQALKQ
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtataacgctgaggctgaagtgatttatgtcggcaaagccaaagacctcaaaaagcgt
ctaaccagctattttcgcaagaatctcgacagcgaaaaaaccaaagctctcgtcagcaac
atcgccaagattgacgtgacggtcacccacaccgaaacggaagcattgatccttgagcac
aattacatcaagcagtatctgcctaagtacaacgtgctgctgcgtgatgataagtcttat
ccctatattttcttaagcgcgcacaaacacccgcgactgtcctcacatcgtggtgccaaa
aaacgccgtggtgaatatttcgggccttatccggattcgggggcagtgcgtgaaactctg
catttgatccagaaaatctttcccgtccgtcagtgtgaagatacggtgtacagcaaccgt
actcgaccttgcttgatgtatcagattgggcgctgtgccggaccttgtgtgaaaggactg
atttctgaccaaggctatcaagagatcgtccattacctacgtcttttcctgcaaggcaaa
gacaaccaagtactgtcgattctggttgagaaaatggagcaggcgagccgtgaactgcgt
tttgaagatgccgctaaagcgcgtgaccaaattcaagccattcgccgcgtacaagagcag
cagtttgtgtcggacgacagtttggaagacttggatgtgctcggttttgcacaagaaaat
ggcattgcttgcatccatattttgatgatccgccaaggcaaagtgctcggcagtcgtagc
cattttccgaaaattccaagtgacacctcgcaggtcgaagtgtttgagagctttttaagc
caatattatttaagtcacagtgaagctcgcagtattccggcacggatcattttaaatcga
ggattgaccgaagaaaccgaggcgctacaaatcgcgatcagtgaacttgcagggcgcaaa
gtcactttccatgtcaatcccaccggcacgcgaggtcgttatctgaaactcgccaatacc
aacgcgctgacggcgatcacgactaagatgaatcacaagatgaccatcagtcagcgcttc
aaagccctgcaagaagagctcggaatggatgcgattacccgcatggagtgttttgatatc
tcgcataccatgggcgaaagcacgatggcctcttgtgtggtgtttaaccaagaagggccg
ctaaagcaagagtatcggcgttacaacatcacgggcatcactggtggggatgattacgcg
gcgatggcgcaagtgttggagcgccgttacagtaagcagcttgatagcagcaaaattccc
gacattatttttattgatggtgggaaagggcagcttaatcgtgcgtacgaaattatctcc
tcatgttggcaggattggccgaagtacccgaagatcatcggcatcgccaaaggggtgaca
cgtaaacctggtttagaaacgctgatcactattgatggtgatgagtttcatctgccgagt
gatgcgcctgcgttgcacttaattcaacacattcgggatgaaagccataaccacgcgatt
gcaggacaccgcgcgcagcgcggaaaaactcgccgtaccagtacacttgagggtatcgaa
ggcgtcgggccgaaacggcgtcaagccttgctgaaatatctgggtggtatgcaggagtta
aaacgcgcttctgttgaagaaatcgccaaagtgccgggcatcagccacgcattggcagaa
aacatttatcaagcattgaaacaataa

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