Vibrio cholerae O1 MJ-1236: VCD_003164
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Entry
VCD_003164 CDS
T00903
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcj03009
]
VCD_003164
Enzymes [BR:
vcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VCD_003164
Ribosome biogenesis [BR:
vcj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VCD_003164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACQ61324
LinkDB
All DBs
Position
1:complement(2411973..2412938)
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AA seq
321 aa
AA seq
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MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN
HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR
ELVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARRKPG
GESSTRNKVANQQQSSRKPRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagttttagcacgtgctggtcatggttctcgtcgtgagctt
gaagctctgatccgagctgggcgtgtaagtgttaatggcaaggtagctgtactgggcgaa
cgcctagaagatgataacgctgtcgtgcgcatcgatggacatgttgtgtctgtgaaagcg
caagaagaggtgatctgccgagttctggcttattacaaaccagaaggcgagctgtgtacc
cgtcatgatccagaaggtcgccgtacggtatttgaccgtctgccgaaaattcgtggttca
cgctggatttctgttggccgtttggacgccaacacgtcaggtttgctgctgtttaccacc
gatggtgaactggctaaccgtttaatgcacccaagccgtcaggtagaacgtgaatatctg
gttcgcgtctttggtgacgtgacggaagaaaaagttcgcaatctcgtacgtggtgtgcag
ctagaagatggtatggcgcgttttgaagatgtgatgtacgccggtggcgaaggcatcaac
catactttctacgtggtaatcaatgaaggtcgtaaccgtgaagtgcgtcgtctgtgggaa
tcacaaggtacgacagtaagccgtctgaagcgcgtacgttacggtgatattttcctcgac
aaaaaactgcctcgcggcggttggatggagcttgatctcaagcaagtgaactacctgcgt
gagttagtagaactgcgtccagagaaagaaacggtgctgaacatggcgcctgatgccgca
acgcgtaagcgtgagcgtacccgtagccagaaaattcgtcgtgcagtacgtcgtcacgaa
gagcgaatttcagctactccgggtcgtagtggaaaagcccctgcgcgccgtaagccgggt
ggtgaatcgagcacgcgcaataaagtggctaaccagcaacaaagctcgcgtaagccgcgc
ggataa
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