Vibrio cholerae O1 LMA3984-4: VCLMA_B0710
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Entry
VCLMA_B0710 CDS
T01871
Name
(GenBank) Transcriptional regulator VpsT
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCLMA_B0710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcl03000
]
VCLMA_B0710
Transcription factors [BR:
vcl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VCLMA_B0710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
TubC_N
GNVR
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AEA80333
LinkDB
All DBs
Position
II:complement(778547..779221)
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AA seq
224 aa
AA seq
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MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSDLWLEENKPESRNIQMLMID
YSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK
GMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA
DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaaaataaactaaacgttagaatgctttctgacgtttgcatgcaatccaga
ttgttgaaagaggcgttagaatcaaaacttcctttagcgctggaaattacaccattttct
gatctctggcttgaagagaataaaccagaaagccgcaatattcagatgttgatgattgat
tattcaagaatttctgatgatgtcttaaccgattacagctcgtttaagcacatcagttgt
cctgatgcgaaagaggtcatcataaactgtccgcaggatattgagcataagctgctcttt
aagtggaataatttggctggagtattttatattgatgatgatatggataccctgatcaaa
ggcatgagtaaaattttgcaagatgaaatgtggttaacgcgtaaactggcccaagaatac
attctccattatcgtgccggtaactcagtcgtgacttcacaaatgtacgcaaaattaacc
aaaagagaacaacagattatcaagttacttggtagtggtgcctctaatattgaaattgca
gataaactctttgtgagtgaaaacacagtaaaaacacatctgcataatgtctttaagaaa
attaatgccaaaaatcgcttgcaggcactgatttgggcgaaaaataacattggaattgaa
gaagtcaattcttaa
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