Volvox carteri f. nagariensis: VOLCADRAFT_73605
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Entry
VOLCADRAFT_73605 CDS
T01330
Symbol
tbpA
Name
(RefSeq) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VOLCADRAFT_73605 (tbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_73605 (tbpA)
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_73605 (tbpA)
Transcription factors [BR:
vcn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
VOLCADRAFT_73605 (tbpA)
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VOLCADRAFT_73605 (tbpA)
RNA polymerase III system
TFIIIB
VOLCADRAFT_73605 (tbpA)
RNA polymerase I system
SL1/TIF-1B
VOLCADRAFT_73605 (tbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
9624113
NCBI-ProteinID:
XP_002948268
JGI:
73605
UniProt:
D8TP00
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MAAHVSGITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALI
FASGKMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGL
AYAHSLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLI
QYKKGDAALPALPAANLMPPPRALPPARQAGQPDGSAEHMENSAASPAPRVGGSGGGNDD
AAAADPFSSTDAVHDVTGPSCHEPATADTAAPQPAAAHAPAPWSCADTQFGTPCVTAALS
AAISLEVCTGRGRWGLLRSVRVKRQRGSFISPGKQLGG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacatgtatctggtattacaccacagctgcagaacgtagtggctactgtgaat
ctgggcacaaagctagacttgaaggagattgctatgcacgcgcgcaacgctgagtataat
cccaagcgtttcgccgccgtcattatgcgtattagagagccaaagacgaccgcactaatt
tttgcgtccgggaagatggtctgtactggagcgaagagcgaggacgactcgaggacagcg
gccagacgttacgccaagatcgtgcaaaagctgggcttcccggccacgttcaaggagttc
aaaatccaaaatattgtggggtcgtgtgacgtcaagttccctattcgcttggaaggcctt
gcgtatgcgcacagccttttcgcaagctacgagccggagctctttccggggcttatctat
cggatgaagcagcccaagatcgtgctgctcatctttgtgtcgggcaaggtggtcctgacg
ggcgctaagacgcgctacgagatctaccaggcctacatgaatatctaccccacactgatt
cagtacaagaaaggagacgcagccttgccggcgctgccggctgcgaatctaatgccgccg
ccgcgtgcactaccacctgcccggcaggccgggcagccagatggatcggcggagcatatg
gaaaattccgcagccagtccagcaccccgggtcggcggcagcggcggcggcaatgatgat
gccgccgccgccgaccccttcagcagcaccgacgccgtccatgacgttacaggaccttca
tgccatgaacctgccaccgccgacaccgctgcaccccaacctgccgccgcccacgccccg
gcaccctggtcttgcgccgacacccagtttgggacaccatgtgttaccgccgccctctcc
gcggcgataagtttagaagtgtgcactgggcgcggcaggtgggggctgctacgatcagtt
cgggtcaagcgccagcgcggcagcttcattagtcctggcaagcaacttggtgggtga
DBGET
integrated database retrieval system