KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_73605
Entry
VOLCADRAFT_73605  CDS       T01330                                 
Symbol
tbpA
Name
(RefSeq) TATA-box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VOLCADRAFT_73605 (tbpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcn03000]
    VOLCADRAFT_73605 (tbpA)
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_73605 (tbpA)
Transcription factors [BR:vcn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    VOLCADRAFT_73605 (tbpA)
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     VOLCADRAFT_73605 (tbpA)
  RNA polymerase III system
    TFIIIB
     VOLCADRAFT_73605 (tbpA)
  RNA polymerase I system
    SL1/TIF-1B
     VOLCADRAFT_73605 (tbpA)
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 9624113
NCBI-ProteinID: XP_002948268
JGI: 73605
UniProt: D8TP00
LinkDB
Position
Unknown
AA seq 338 aa
MAAHVSGITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALI
FASGKMVCTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGL
AYAHSLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLI
QYKKGDAALPALPAANLMPPPRALPPARQAGQPDGSAEHMENSAASPAPRVGGSGGGNDD
AAAADPFSSTDAVHDVTGPSCHEPATADTAAPQPAAAHAPAPWSCADTQFGTPCVTAALS
AAISLEVCTGRGRWGLLRSVRVKRQRGSFISPGKQLGG
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggccgcacatgtatctggtattacaccacagctgcagaacgtagtggctactgtgaat
ctgggcacaaagctagacttgaaggagattgctatgcacgcgcgcaacgctgagtataat
cccaagcgtttcgccgccgtcattatgcgtattagagagccaaagacgaccgcactaatt
tttgcgtccgggaagatggtctgtactggagcgaagagcgaggacgactcgaggacagcg
gccagacgttacgccaagatcgtgcaaaagctgggcttcccggccacgttcaaggagttc
aaaatccaaaatattgtggggtcgtgtgacgtcaagttccctattcgcttggaaggcctt
gcgtatgcgcacagccttttcgcaagctacgagccggagctctttccggggcttatctat
cggatgaagcagcccaagatcgtgctgctcatctttgtgtcgggcaaggtggtcctgacg
ggcgctaagacgcgctacgagatctaccaggcctacatgaatatctaccccacactgatt
cagtacaagaaaggagacgcagccttgccggcgctgccggctgcgaatctaatgccgccg
ccgcgtgcactaccacctgcccggcaggccgggcagccagatggatcggcggagcatatg
gaaaattccgcagccagtccagcaccccgggtcggcggcagcggcggcggcaatgatgat
gccgccgccgccgaccccttcagcagcaccgacgccgtccatgacgttacaggaccttca
tgccatgaacctgccaccgccgacaccgctgcaccccaacctgccgccgcccacgccccg
gcaccctggtcttgcgccgacacccagtttgggacaccatgtgttaccgccgccctctcc
gcggcgataagtttagaagtgtgcactgggcgcggcaggtgggggctgctacgatcagtt
cgggtcaagcgccagcgcggcagcttcattagtcctggcaagcaacttggtgggtga

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