Volvox carteri f. nagariensis: VOLCADRAFT_92180
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Entry
VOLCADRAFT_92180 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
9615643
NCBI-ProteinID:
XP_002951639
JGI:
92180
UniProt:
D8TYT7
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MSGLVLALVALCAGVVTASASLKTFAGIWPQPRSQRPVATFYVGQHTGSLTTRHAATTAY
KAAVKPPSLARGRHQGSRQYGRTPALTCASRFYMVSIFPLLVLLVALFLPGSVPDLCFCQ
GQSPTPSSPGPKIVLQVDNQDAQLGPAMDESYQIQVPGRGSRGTRGEVLIQAATQVGAVH
ALETLAQLVVSYDHVKQQQPQQQLEGPGPLWLLAGNISDWPRFTHRGLLVDTARHFLPLS
VLHTTLDAMAANKLNVLHWHATDDQSFPMEALVASEGGAVSDLATRGSFGDRMLYSREEV
AGRPRTRRWVPYWVLLRRCSPIRSFTRGEMKLTWTAGGATLLYGSGWSHTGLAGRSYSAL
IRTCCRSLTSPTAAHSLVVRLFPTCRTAVLPLLAAAYYMSRVLRGIVNGGSDSGGGSRGP
PRTPVVWQEAFDVAGGTGLPPGTIVQVWQSDVGPVGRTKITAATGLVGGASHGAGAAARA
ASGGEGVDLASFDHNHGHMDLDDSDPNPYLDPYGDLGLEDEEELMELLEAGEIAQEVAAG
RQLLFMEGLLGLLRRKEEPAVVAGGVGAVRGGGGGGGGGGGFDGGAEEAGGPRKRKKMKK
MKKMKKMKKMKKRAPGGGGRGGGGLGGGVGLRGGGGAHHAVGAGYDDADNDLYRRLRLGR
RLRYYQGKHEDDGVEYLQPYLHPVVRGIGRGTPSSSSSSSSSSSPSATAAAQQQQQQQQH
HHHHHHQDPDPELRSELQRLREAVAAADGAPGGGSSGSSASRRTQAEELAAVTAAGFQAI
LSSGWYLDWISWGEDWRRFYSQEPLGFEGSEEQKARVLGGEACMWGEYVDATNLISRTWP
RASAVAERLWSDAAVRDEEEAGQRLRVHRCRMALILSASKTGLMAGACFFVAFGSGAAHA
AKRAPPHAPEIATVAEVEQQAPANISTGSGSAQIAVDWQRLAKDVQASPYTIPVVAVVFL
VAGVSLLRGGSKKEEAAPSTATSSSGSASAVVSSTTPPTEEAPQPPSPVLAATPEPVPEL
TPEVAAEPVPEPEPPAPAAPAPASPVVVTARPMMVLANPNMAPQPVRPPSQPSTAITAAA
APADPQPSPAVVSSPPAPAPPTVSPIAAAPEPAPVPAAEASAPPSDAAPVDTQPPKPEPV
KPTASEVVVAESVPAAEPAPAEPAPEPVVDSRPSAKEWIAQWRVSQPPKPEPVAAVPASA
AAVVLPELPASEPVVPVPEPMVDSRPSAKEWIAQWRESQPQKQHDAVPVTAILEEMPSLA
AATPAPQPASEPALAAPTVAAVPEPVAAAPTVAAVPEQVAAAPTVAAVPEPVAAAPTIAA
VPEPVAAAPTVAAVPEQVAAAPTVAAVPEQVAAASTVAPDPATGAPAPAFTRERKMSAAE
LLKLSGVQPEVLSSVAKSTAVVNSNGYVMFKFVEGDEAVTAQPVSVLQPPAVVPSAPAAA
AAAGRSGFDSSISNDDVGEPPAPPPPAPSKSVVATVAAARVVQGPPPPSVSAPAPAPSSG
NAAKLAPVASATGGNGAAAASNSRRSSVSASASASSGASKESLAAAARDPIVMTAAVVVG
AARQMKGFGTFVSDGLFPAVGALLGGGNNNNGKRNGQ
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggttggtcctcgcgctggtggcgctttgtgcaggagttgtgactgcaagcgcc
agcctaaaaacctttgccggtatttggcctcagcctcggagtcagcgtcctgtggcgacg
ttctacgtcgggcagcatacaggttctctcacaacgcggcacgcagcgactaccgcctac
aaggcagccgtgaagccgccgtctctggcgcgtggacggcatcaagggagtcggcagtac
ggacgcacacccgccctaacgtgcgcgtcacgtttttacatggtctccatatttcccctg
ctggtcctcctcgttgccttgtttttgccagggtcagtccccgacctctgtttttgccag
ggtcagtccccgactcctagttcccccggtcccaagattgtgctgcaagtagacaatcag
gatgctcagttgggccctgcgatggacgagtcgtaccagatccaggtcccgggcaggggc
tcccggggcactcggggcgaggtgctcattcaggcagcaacgcaggtgggtgccgtacat
gccttggagaccctggcgcagctggtggtgtcgtacgaccacgtgaagcagcagcagccg
cagcagcagctggaggggccggggccgttgtggctgctagctggcaacatcagcgactgg
cctcgtttcacacaccgcggcctgcttgtggacaccgcgcgccacttcctgccgctctcc
gtcctgcacaccactctggacgccatggccgccaacaagctcaacgtgctgcactggcac
gccacagacgaccagtccttccctatggaggcgctggtggcttcggagggcggcgccgtt
tcggacctggcgacccgcgggtcgtttggggatcggatgttgtactccagggaggaagtg
gcggggaggcctcgtacgcggcggtgggtgccgtactgggtgctgctgcggcgctgctcc
ccgatccgctccttcacgcggggggagatgaagttgacctggactgctggcggagcgacc
ctgctgtacggcagtggttggagtcacacgggcttagcaggacgcagctactcggccctc
atccgcacctgctgccgctccctaacctcccctactgccgctcactcgctcgtggttcgt
cttttccccacctgccgtactgccgtactccccttgctggctgcagcgtattacatgagc
cgagtcctgcggggtattgtcaacggcggtagcgatagtggtggtggcagccgcggcccc
ccgcgtacgccggtggtgtggcaggaggccttcgacgtcgccggaggcactgggttgccc
ccaggtaccattgtgcaggtctggcaatccgatgtcggacccgtgggtcggacaaagatt
accgccgccactggccttgtcgggggagcgtctcatggagcaggagcagcagcgcgggca
gcatctggcggcgagggtgtggatttggcctcctttgatcataatcatggacacatggat
ttggacgattcggatccaaatccatatcttgatccgtacggtgatttgggtttggaggac
gaggaagagctgatggagctgctggaggcgggggagattgcacaggaggtggcggcgggc
aggcagttgctgtttatggaggggctgctgggtctcttgaggcgcaaggaggagccggcg
gtggtggcaggaggggtgggagccgttcggggaggcggtggcggcggcggcggcggcggc
ggcttcgatggtggtgctgaggaggccggcggcccacggaagcggaagaagatgaaaaag
atgaagaagatgaaaaagatgaagaagatgaagaaacgggcgccaggaggcggaggcaga
ggcggaggcggcttaggtggaggagtcggcttacgtggcggcggcggcgcccaccacgcc
gtcggcgccggctacgacgatgccgataacgacctgtaccgccggctccgacttggccgt
cggctgaggtactaccagggcaagcacgaggatgacggtgtcgagtacttgcagccctac
ctgcatcccgttgtccggggaatcggccggggaaccccatcttcgtcatcatcatcatca
tcatcatcatcgccttccgccaccgcggcagcacaacagcagcagcagcagcagcagcac
caccaccaccaccaccaccaagatccggatccggagctccgttccgagttgcagaggctg
cgtgaggcagttgcggcggcggatggggctcctggcggcggcagtagcggcagtagcgcc
agcaggcggacccaggcagaggagctggcggcggtgacggccgcgggcttccaggctatc
ctctcctccggatggtacttggactggattagctggggtgaggactggcggcggttctac
tcgcaggagcccctggggttcgagggcagtgaggagcagaaggcgcgagtgctggggggc
gaagcgtgcatgtggggggagtatgtcgacgcgactaacctaatttccaggacgtggcct
cgcgcaagtgcggtggctgagcggttgtggtcggatgcagcggtgcgggacgaggaggag
gcggggcagcggctgcgagtacatcgttgcaggatggcgctaatactcagcgcaagcaag
actggtctcatggcgggagcgtgcttcttcgttgccttcgggagcggggctgctcacgcg
gcgaaacgggctcctccccatgcgcctgaaatagcgacggtcgcagaggtggagcagcag
gcacccgccaacatctcaacgggaagtggcagcgcacagatcgccgtggactggcagcgg
ctggcgaaggacgtccaggcttcaccgtacacaatcccggtggtagccgtggtgttcctt
gtcgcgggcgtgagcctcctgagaggtggcagtaagaaggaagaagctgcaccgtcaacg
gcgactagcagctctggcagcgcaagcgctgtggtttcatccacaacgccaccgacagag
gaggcgccacaaccgccgtcaccagttttggcagcgactcccgagccggttccggagctg
actcctgaagtggctgcagagcctgtaccggagccggagccgccggctcccgcagctccc
gctccggcttcaccggttgtggtgacggcacggcccatgatggtgttggcaaatcccaat
atggcgccccaaccggtaaggccgccatcacagccgtccacagccatcacagcagcagca
gcgccggcggatccacagccctcccctgcggtggtttccagccccccggcccctgcaccg
ccaactgtttctccaattgctgcggctccggaaccagcccctgtgccggcggcggaagcc
tcggcccctccatccgacgctgctccagtggatacccaaccccccaagcctgagccggtg
aaaccgactgcttccgaggttgtggtggccgaatctgtaccagcagccgaacctgcaccc
gcggagcctgctccggaacccgtcgttgacagccggccctcagctaaggagtggattgcg
cagtggcgtgtttctcagcccccgaagccggagccagtcgctgccgtgcccgcctctgca
gcagcggtggtgctgcctgagctgcctgcttcagagccggtggtgccagtaccggaaccg
atggtggatagccgtccgtcggcaaaggagtggattgcgcagtggcgcgaatcacagccg
caaaagcagcatgatgctgttccggtgactgcaattcttgaagagatgccgtcgcttgca
gcagcgacacccgcgcctcagccggcttcggagccagccctcgctgcccctactgttgct
gcggttccggagccagtcgccgctgcccctactgttgctgcggttccggagcaagtcgcc
gctgcccctactgttgctgcggttccggagccagtcgccgctgcccctactattgctgcg
gttccggagccagtcgccgctgcccctactgttgctgcggttccggagcaagtcgccgct
gcccctactgttgctgcggttccggagcaagtcgctgccgcttccaccgttgcaccggac
ccagcgacgggcgctccggcaccagctttcacccgggagcggaagatgagcgccgcagag
ctactgaagctgtcgggcgtgcagcctgaagtgctgagctccgtggcaaagagcacggcc
gtcgtcaacagcaatgggtacgtgatgttcaaatttgttgaaggcgacgaagccgtgaca
gcgcagccagttagcgtgttgcaacctccggccgtggtgccatcggcgccagcggcggcg
gccgctgcaggccgcagcggcttcgacagctccatcagcaacgatgacgtcggcgagccc
ccggcgccgccaccaccggccccgtcgaaatccgtcgtggcaacggttgcagcggcacgc
gttgtgcagggaccgccgccgccgtcggtttcggcgcctgcgccagctccgtccagcggc
aacgcggctaaactggcgccggtggcgtctgccaccggtggcaacggcgcagcggccgcg
tccaacagtcgtcgtagttctgtctcggcctcggcgtccgccagcagcggtgcgagcaag
gagtccctggcagccgcggctcgtgaccccatcgtgatgactgcagctgtggttgtgggc
gcggctcgtcaaatgaaaggctttggaactttcgtttcggatgggctgttccccgcagtg
ggggcgctgctaggtggcggcaacaacaacaatggcaaacgaaacgggcagtaa
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integrated database retrieval system
