Vibrio cholerae O1 El Tor MS6: MS6_2029
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Entry
MS6_2029 CDS
T03666
Name
(GenBank) GGDEF family protein
KO
K20958
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MS6_2029
Enzymes [BR:
vcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
MS6_2029
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE4
DUF948
Ost4
Motif
Other DBs
NCBI-ProteinID:
BAP03684
LinkDB
All DBs
Position
1:complement(2299920..2301437)
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AA seq
505 aa
AA seq
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MNLNNFSLRWLTTLNALAVVLGFLMFYLTFKYFWSHDREVAQVLQLQQAELQRVETLLSL
ERKAMGASLADYAAWDEMADFIAKPTLEFTQSNIGEHAFSSQFLDGVFIYDPEGNLVWGK
KYDAATGQSSSYEHLLPDFSRILQQATRLSVDEISTSVRYMVVEDEPYLAATARVCDSDG
KGCNKGFLIFIKKVRAQFANVVEQATGVDIEVLTCKNDAPLPQDEVDVSYIKQLDYSGNS
SVLFKINHHIKHPPFIRTEEILALLFFSLVMYLVNLWVVIALIKPITTASQVLQQFKTSG
GKMPDASTFISSEMKEFATTINRIVGQLEDSQQVLRWQSEHDPLTRISNRRHLEKQLKSY
LSDRPQAYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARFGGEE
FCVVLASDCAFDAEQYAQQMRSKIEQLAIANPVDALCQYLTVSIGGVYAISPKMESYLSL
FHQADMALYHAKEHGRDRYVVRNFV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaataactttagcctacgctggctaacgacactcaatgcgttagcggtggtg
ttaggctttttaatgttttatctgacctttaaatatttctggtcacatgatcgtgaagtt
gcgcaagtgctgcagttacaacaggccgagttgcagcgggttgaaaccttgttgtcgtta
gaacgtaaggcgatgggggcttctttggcagattatgccgcttgggatgaaatggcagac
ttcattgcaaaacccacccttgagttcacacaaagcaatattggagagcacgctttcagt
tcacaattcctcgatggcgtatttatctatgatcctgagggcaatttggtttggggcaag
aaatatgacgcagcaacggggcagagctctagctatgagcacttattgccggatttttca
cgtattttacagcaggcgacacgtttaagtgtggatgaaatctcgacttccgttcgttat
atggtggtggaggatgagccctatttagctgccacggctcgtgtctgtgacagtgatggg
aaagggtgtaacaaaggtttcttaatctttattaaaaaagtccgcgcccagtttgcgaat
gtggttgagcaagccactggtgtcgatattgaagtcttaacctgtaaaaatgatgcgccc
ttaccgcaagacgaagtggatgtttcatacatcaagcaactcgattacagcggtaattcc
agtgtgttgtttaaaattaaccatcacattaagcatcctcccttcattcgaaccgaagaa
attcttgctttgctgttcttttcactggtgatgtacttagtcaatttatgggtggtgatt
gccttgatcaaaccgatcacgaccgccagtcaagtgttgcaacaatttaaaacatcgggc
ggaaaaatgccggatgcgagtacttttatctcatcggagatgaaagaatttgccactacg
atcaaccgaatcgtcggacaattggaggatagtcaacaagtgttacgttggcagtctgag
catgatccactaacccgcatttccaatcgtcgccatttagaaaagcagcttaaaagttat
ttgagcgatcgtccgcaagcctatctggtgctgtttcttgtcgatatcgattttttcaaa
cgtttcaatgacagctttggtcatttggctggcgatgaagccttatgttccgttgctgat
gtgctccaatcggtggagttccatggcgagaaaatcgtggcgcgctttgggggagaagag
ttttgtgttgttttagcttcggactgtgcatttgatgcagaacagtatgcacaacagatg
agaagcaaaatcgagcagctcgcgattgcaaatccggttgatgcactctgccaatatcta
acggtgagcattggtggtgtgtatgctatttctccaaagatggagtcttatctctctttg
ttccatcaggcggatatggcactttatcatgcgaaagaacacggacgagatcgatacgtt
gtgcgaaattttgtctaa
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