KEGG   Vibrio cholerae O1 El Tor MS6: MS6_2147
Entry
MS6_2147          CDS       T03666                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcs  Vibrio cholerae O1 El Tor MS6
Pathway
vcs03410  Base excision repair
vcs03430  Mismatch repair
vcs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MS6_2147
   03430 Mismatch repair
    MS6_2147
   03440 Homologous recombination
    MS6_2147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcs03400]
    MS6_2147
DNA repair and recombination proteins [BR:vcs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     MS6_2147
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MS6_2147
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MS6_2147
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: BAP03802
LinkDB
Position
1:complement(2451002..2452639)
AA seq 545 aa
MAQLEKAAKALHSFKQLHGIDRAVELLFAAIAEQKRIIVVGDFDADGATSSALSVLALRM
LGSRNVDYLVPNRFEDGYGLSPEVVDQAIERGAEMIMTVDNGVSSLEGVRYAKQKGLQVV
VTDHHLPGQELPEVDAMVNPNLQQCAFPSKALAGVGVAFYLMMALCVHMRQQGWFAAQGM
VEPKLMELIDLVALGTVADVVPLDDNNRILVHQGLQRIRAGLARPGIQALIEVAKRDARR
LVAADFGFALGPRINAAGRLDDMSFGVELLLCNNIHAARRMASELDGLNQTRKEIEEGMK
QEAVAFCERLQLSDDRELPYGLVLFQRDWHQGVIGILASRIKEKYHRPVIAFAEGGDGKL
KGSCRSVPGLHMRDALDKIDTQNPGIILKFGGHAMAAGLTIEEQNFEHFCRLFDQLVREE
LDEAALQGIILSDGELKPEEFSLHTAELLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKH
LKLMLEPLYKGFPTNVMIDGIAFNVDLRRWPDVSVKTVRLAYKLDINEFRGNQSLQLMID
YLEAK
NT seq 1638 nt   +upstreamnt  +downstreamnt
gtggcacaacttgaaaaagccgccaaagcgctgcactcattcaagcagttacatggtatt
gatcgtgcggttgagttgctgttcgcagcgattgctgagcaaaaacgcatcatagtcgtc
ggtgattttgatgccgatggcgcaaccagttcggcactttccgtgctcgcgctgcgtatg
ctcggtagtcgtaatgtcgattacttagtgccaaaccgttttgaagatggttatggtctg
agccctgaagtggttgatcaagcgattgagcgtggcgcagagatgatcatgaccgtggat
aacggcgtttcatcactggaaggggtgcgttacgccaaacagaaagggctgcaagtggtg
gtcaccgatcatcacttaccgggacaagaactccctgaagtcgatgccatggtaaacccg
aacttgcagcagtgtgcttttccttctaaggcgctggctggggtgggggttgctttctat
ttgatgatggcactttgtgtgcacatgcgtcagcaaggttggtttgccgcgcaaggcatg
gttgaaccgaaattgatggaactgatcgatttagtggcactcggtacggtcgccgatgtg
gtgccactggatgacaacaatcgtattttggtgcaccaaggtttgcagcgtattcgtgcg
ggtttagcgcgccccggtattcaagctctgattgaagtcgccaaacgggatgcgcgccgt
ttggtcgctgctgattttggctttgcgcttggaccacggattaacgccgcagggcgtttg
gatgatatgtcgttcggcgttgaacttttgctgtgtaacaacattcacgctgcgcggcgt
atggcgagtgagctggacggcctcaatcaaacccgaaaagagattgaagaggggatgaag
caagaggcggtcgcgttttgtgagcgtttgcaactgagcgatgatcgcgagctgccttac
ggtttagtgctgtttcagcgcgattggcaccaaggggtgatcggcattcttgcttcgcgc
atcaaagagaaataccaccgacccgtgattgcgtttgctgaaggtggtgatggcaagcta
aaaggttcatgtcgctcggttcccggtctgcatatgcgtgatgcactagataaaattgat
acgcaaaacccgggcatcatactcaaatttggtggtcacgcgatggcggctggattaacc
attgaagagcaaaattttgaacatttttgccgattgtttgaccagctagtgcgtgaagag
ctggatgaagcagcactccaaggcatcatcctcagcgatggcgaactgaaaccggaagag
ttttcgctgcataccgccgaattactgcgtgccggtggcccgtgggggcaagcgtttcct
gaacccctatttgatggtgaatttaaagtgctgcaccaaaaactggttggcgaaaaacac
ctcaaactgatgcttgagccgctgtataaaggctttccaaccaatgtgatgatcgacggg
attgcgtttaatgtcgacctacgccgctggccggatgtctcagtcaaaacggtacgtttg
gcgtacaaactcgacatcaacgagtttcgcggtaatcaatcattgcaactcatgattgat
tatctggaagcgaaatga

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