Vibrio cholerae O1 El Tor MS6: MS6_2147
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Entry
MS6_2147 CDS
T03666
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs03410
Base excision repair
vcs03430
Mismatch repair
vcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MS6_2147
03430 Mismatch repair
MS6_2147
03440 Homologous recombination
MS6_2147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcs03400
]
MS6_2147
DNA repair and recombination proteins [BR:
vcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MS6_2147
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MS6_2147
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MS6_2147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BAP03802
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Position
1:complement(2451002..2452639)
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AA seq
545 aa
AA seq
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MAQLEKAAKALHSFKQLHGIDRAVELLFAAIAEQKRIIVVGDFDADGATSSALSVLALRM
LGSRNVDYLVPNRFEDGYGLSPEVVDQAIERGAEMIMTVDNGVSSLEGVRYAKQKGLQVV
VTDHHLPGQELPEVDAMVNPNLQQCAFPSKALAGVGVAFYLMMALCVHMRQQGWFAAQGM
VEPKLMELIDLVALGTVADVVPLDDNNRILVHQGLQRIRAGLARPGIQALIEVAKRDARR
LVAADFGFALGPRINAAGRLDDMSFGVELLLCNNIHAARRMASELDGLNQTRKEIEEGMK
QEAVAFCERLQLSDDRELPYGLVLFQRDWHQGVIGILASRIKEKYHRPVIAFAEGGDGKL
KGSCRSVPGLHMRDALDKIDTQNPGIILKFGGHAMAAGLTIEEQNFEHFCRLFDQLVREE
LDEAALQGIILSDGELKPEEFSLHTAELLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKH
LKLMLEPLYKGFPTNVMIDGIAFNVDLRRWPDVSVKTVRLAYKLDINEFRGNQSLQLMID
YLEAK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaacttgaaaaagccgccaaagcgctgcactcattcaagcagttacatggtatt
gatcgtgcggttgagttgctgttcgcagcgattgctgagcaaaaacgcatcatagtcgtc
ggtgattttgatgccgatggcgcaaccagttcggcactttccgtgctcgcgctgcgtatg
ctcggtagtcgtaatgtcgattacttagtgccaaaccgttttgaagatggttatggtctg
agccctgaagtggttgatcaagcgattgagcgtggcgcagagatgatcatgaccgtggat
aacggcgtttcatcactggaaggggtgcgttacgccaaacagaaagggctgcaagtggtg
gtcaccgatcatcacttaccgggacaagaactccctgaagtcgatgccatggtaaacccg
aacttgcagcagtgtgcttttccttctaaggcgctggctggggtgggggttgctttctat
ttgatgatggcactttgtgtgcacatgcgtcagcaaggttggtttgccgcgcaaggcatg
gttgaaccgaaattgatggaactgatcgatttagtggcactcggtacggtcgccgatgtg
gtgccactggatgacaacaatcgtattttggtgcaccaaggtttgcagcgtattcgtgcg
ggtttagcgcgccccggtattcaagctctgattgaagtcgccaaacgggatgcgcgccgt
ttggtcgctgctgattttggctttgcgcttggaccacggattaacgccgcagggcgtttg
gatgatatgtcgttcggcgttgaacttttgctgtgtaacaacattcacgctgcgcggcgt
atggcgagtgagctggacggcctcaatcaaacccgaaaagagattgaagaggggatgaag
caagaggcggtcgcgttttgtgagcgtttgcaactgagcgatgatcgcgagctgccttac
ggtttagtgctgtttcagcgcgattggcaccaaggggtgatcggcattcttgcttcgcgc
atcaaagagaaataccaccgacccgtgattgcgtttgctgaaggtggtgatggcaagcta
aaaggttcatgtcgctcggttcccggtctgcatatgcgtgatgcactagataaaattgat
acgcaaaacccgggcatcatactcaaatttggtggtcacgcgatggcggctggattaacc
attgaagagcaaaattttgaacatttttgccgattgtttgaccagctagtgcgtgaagag
ctggatgaagcagcactccaaggcatcatcctcagcgatggcgaactgaaaccggaagag
ttttcgctgcataccgccgaattactgcgtgccggtggcccgtgggggcaagcgtttcct
gaacccctatttgatggtgaatttaaagtgctgcaccaaaaactggttggcgaaaaacac
ctcaaactgatgcttgagccgctgtataaaggctttccaaccaatgtgatgatcgacggg
attgcgtttaatgtcgacctacgccgctggccggatgtctcagtcaaaacggtacgtttg
gcgtacaaactcgacatcaacgagtttcgcggtaatcaatcattgcaactcatgattgat
tatctggaagcgaaatga
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