Vibrio coralliilyticus OCN014: JV59_40010
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Entry
JV59_40010 CDS
T03497
Name
(GenBank) diguanylate cyclase
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
JV59_40010
Enzymes [BR:
vct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
JV59_40010
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Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
DDE_Tnp_ISL3
DUF5503
PUA
Motif
Other DBs
NCBI-ProteinID:
AIU68371
LinkDB
All DBs
Position
1:3421550..3424024
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AA seq
824 aa
AA seq
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MHTYSALIRDEQQLTRFLGSLSDDASQSVLIQLLSSQDEHQICSYAQLIEQRLPEAKIIG
HSTRHVIHQGDIHHHSTLIAVSVFSGTQLSVAHVPLQGHPDNEAVSLAEQLELNEQSKLI
ISFSQLTNGRDYNLYLALNPIADVPVCGGLAASVDGQPAWLLLGTDIHHDSSIAVALHGE
SLSVWRSAFAEWNPIGSPLRVTAVNGNKLISLNHEPAYDVFRQRLADGKALTLEQMLSFP
LQRDNRQQICVPSELHPSGVVELDSPLEVGDEVRICYNHPSVTLEQVRHNTAQLAQYNPE
AVFIYNCESRLEFIEGTSEIKPFDRFESCIGSYCMGELYRNEQQEVLHHSMTYVALSEND
RQPLQHQLQEEYPISPLFHLIRHSIEELDETRKQIEEKLARQTEKLIESYRYDKHTGLKN
RAALQEEVRGADANTHLITLKLSNFHQVNEKYGYQVADELIRDLTDLFVVQLETHRGEAA
LRQLYYIGIAEWALVFSSQESSERIRQEFLLFADQIEHINFEPYGLPEVDYLSVSVTGGL
ASMKDFPNIEGEELLLRAIDARRKGKAHNTHLYNAKDCATGIEAQQERLALMGSVSRAIL
NQRILTFSQPIFAAHSHEMVSQECLVRIEDEGEIIAPGRFLPIIEDTHLYTRLSRFMLSS
TLEYMADKAMPFSINLSPQDMLSDKTLYLLEESIARLNDPSRLGLEVLESEQIKDFSRMT
EICGHFKAMGVRLLVDDFGSGYSNIDQIIRLEPDIIKLDGSLIKTIDTDPKQRQITGQLV
KLCQVLNAKTVAEFVHNQAVCEIAEDLGVDYLQGFYLGEPTRLF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcatacctattctgctcttatcagagatgaacaacagctcacccgctttcttggttcc
ctgtctgatgacgcatcgcaatcggttttgattcaattattgtcatcacaagatgaacac
cagatctgcagttacgctcagttgattgaacagcgtttacctgaggccaaaattattggc
cacagtacccgtcatgttatccatcagggagatattcaccatcacagcacgctgattgca
gtatcggttttctctggtactcaattgagtgttgcccatgtccccctgcaaggtcacccg
gataacgaagcggtttctctcgctgagcaactcgaactcaatgagcagagtaagctcatc
atcagtttttcccagttgacgaatggtcgtgactacaacctgtacttggcactcaacccg
attgctgatgtgccagtgtgtggtggcctggcagccagcgttgacggccagcctgcttgg
ttactgcttggcacagacattcatcatgattcttcaatcgccgtcgccttgcacggtgaa
tcactctcagtatggcgcagtgcgtttgctgaatggaacccgattggcagcccactgcgc
gtaaccgcggtaaatggcaataagctgatatcgctcaatcatgaacctgcttacgatgtg
tttcgccagcgtttagccgacggcaaagccctaacgctggaacaaatgctgagttttcca
ctgcaacgcgataatcgtcagcaaatctgcgtgccgagcgagctgcatcccagcggcgtg
gtggagttggacagccccttagaggtgggagacgaagtacgaatttgctacaaccacccg
tcagtgactttagagcaagtcaggcacaataccgcccaattggcgcagtacaatccagaa
gcggtgtttatctacaattgcgaatctcgccttgagttcattgaaggtaccagcgaaata
aaaccgtttgatcgtttcgaatcttgtatcggttcctactgcatgggggagctgtatcgc
aatgaacagcaggaagtcttgcatcacagcatgacttacgtggcgttgagtgaaaatgat
cgccagcctttgcaacatcagttgcaggaagagtacccgatttcccctttgtttcatctg
atccgtcattcaatcgaagagttggatgagacacgtaaacagattgaagaaaagcttgcc
cgccaaacggaaaaactgattgagagctatcgttacgacaagcatacggggctgaagaat
cgggcggcacttcaggaagaggtgcgaggagctgatgccaatacgcacctgatcacctta
aagttgtctaacttccatcaagttaacgagaaatatggctatcaggtggcggatgagcta
atccgtgacctgaccgacctgtttgttgttcagctcgaaacacatcgcggtgaggcagcg
cttcgccagttgtactacatcggtattgccgaatgggctttggttttcagttcgcaagag
agcagtgagcgcatccgccaagaatttctactgtttgccgatcagattgaacacattaat
tttgagccttacggcctacctgaggtggattacctgtcggtgtcggtcacgggcgggttg
gccagcatgaaggactttcccaatattgaaggggaagaactattactgcgtgcgattgat
gcgagacgtaaaggtaaggcgcacaacacccatttatacaatgccaaagactgcgcgaca
gggattgaagcccaacaagaacgcttggctctgatggggtcagtgagccgcgcgatatta
aatcaacgtattctgaccttcagccagccgattttcgcggctcactctcatgaaatggtg
tcacaggagtgtctggttcgcattgaagatgaaggcgaaattatcgctccggggcgcttt
cttcccatcattgaagacacgcacctgtatacccgcctaagtcgctttatgttgagttcg
acgctggaatatatggcggacaaggctatgcctttttcgatcaacttgtcgccgcaagat
atgctgagtgataaaacgctctatttgcttgaagagtcgattgctcgccttaatgatcca
agtcgccttggtctggaagtgctggagtctgagcagatcaaagacttttcaaggatgacg
gagatctgcggacactttaaggcgatgggggttcgtctgctggtggatgattttggtagc
ggttattccaatatcgatcagattattcgccttgagccagacatcatcaagctcgatggt
agcttgatcaaaaccatagacacggacccgaaacagcgccaaatcactggtcagttagtc
aaactttgccaagtgctcaacgcgaagacggtcgcggaatttgttcacaaccaagcggtg
tgtgagattgcggaagacttaggggtagactatttacaaggtttctatctgggggagcca
acacggctattttag
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