Vibrio coralliilyticus RE98: IX92_01050 Help Entry IX92_01050        CDS       T03444                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism vcy  Vibrio coralliilyticus RE98 Pathway vcy02020   Two-component system vcy02040   Flagellar assembly vcy05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vcy00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     IX92_01050  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     IX92_01050   09142 Cell motility    02040 Flagellar assembly     IX92_01050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vcy03021]     IX92_01050 Transcription machinery [BR:vcy03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      IX92_01050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 TetR_C_5-like Motif Other DBs NCBI-ProteinID:  AIW17715 UniProt:  A0A7Y4DWZ1 LinkDB All DBs Position 1:complement(218612..220072) Genome browser AA seq 486 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEGSEETSNVE DKAASDEKEPNAEIAEPEVKDSSELIEKSEISNELEIDTTWEDVYSANTGSTGIALDDDA PVYQGETTQSLHDYLTWQLDLTPFSETDRTIAMAIIDAVDDYGYLTISTEDILESFDNEE IELEEIEAVRKRVQQFDPLGVASNNLQDCLLLQLATFPEDTPWLKEAKLVLTDYIDQLGN RDYKLIIKDAKLKEAELKEALKLIQQLDPRPGSRIAAEHAEYVIPDVSVFKDHGKWVVTI NPDSVPRLKVNQQYAALGKGNSSDSQYIRSNLQEAKWLIKSLESRNETLLKVAKCIVEHQ RDFFEYGEEAMKPMVLNDVALDVDMHESTISRVTTQKYMHTPRGIFELKYFFSSHVSTDN GGECSSTAIRALIKKLVAAENSAKPLSDSKIAALLADQGIQVARRTIAKYRESLGIAPSS QRKRLL NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt atgaaaccctcattacaactcaagctaggacagcagttagcgatgaccccacagcttcag caagcaattcgcttgttgcagttgtcaacgttagatcttcaacaggaaattcaggaagcc ttggattctaaccctctgctagaagtcgaagaaggcagcgaagagacctcaaatgttgaa gacaaagcagcgagtgatgaaaaagagccgaacgctgaaatcgcagagccagaagtcaaa gacagctcagaactgatagagaagtctgaaatcagcaatgagcttgagattgataccact tgggaagatgtctatagcgccaatacaggcagtactggtattgcgttagatgatgatgcg ccagtctatcaaggcgaaaccactcaatctctgcacgactacctcacttggcagttagac ctgactccttttagcgaaacggatcgaaccatcgctatggccatcattgatgctgtagac gactatggttacctgaccatttctaccgaagatattcttgaaagctttgataatgaagaa atagaactcgaagaaatcgaagccgtacgtaagcgcgttcaacaatttgacccattgggt gtcgcatcaaataacttgcaagactgcttgctgctccaattggctaccttcccagaagat acaccgtggttgaaagaagcgaagttagtactgactgactacatcgaccaactgggcaat cgagactacaagctgatcatcaaagacgcaaagcttaaagaagcagagctcaaagaagct ctaaagctcattcagcagctcgaccctcgacctggaagcagaatcgctgcagagcacgca gaatacgtcatacccgatgtttccgtgttcaaagatcatggtaagtgggtagtcactatc aacccagactcagtaccacgtcttaaggtcaatcaacagtacgcagcacttggcaaaggc aacagttcagatagccaatacattcgctcaaacttgcaggaagcaaaatggctgattaag agcctagaaagtagaaatgagacgctactcaaagttgctaagtgtattgttgaacatcag cgtgatttctttgagtatggtgaagaagcgatgaagccgatggttctcaatgacgtcgcc ttagatgtcgatatgcacgaatcaacgatttcacgtgtcacaacccaaaaatacatgcat acccctcgtggtattttcgaactgaagtatttcttctccagccatgtcagtaccgacaac ggtggagaatgttcatccactgcaatccgagcattgattaaaaagctcgtcgctgctgaa aacagtgctaaaccactgagtgacagcaaaattgcagctctactcgctgaccaagggatt caggtcgctagacgaacaatagctaaataccgggaatcactaggcattgccccttcgagt cagcgcaaacgcctgctttag

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