Vibrio coralliilyticus RE98: IX92_01800
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Entry
IX92_01800 CDS
T03444
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcy03009
]
IX92_01800 (rumA)
Enzymes [BR:
vcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IX92_01800 (rumA)
Ribosome biogenesis [BR:
vcy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IX92_01800 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_15
Methyltransf_23
Met_10
PrmA
Methyltr_RsmB-F
Methyltransf_12
DOT1
FtsJ
Ribosomal_L22
DREV
Ubie_methyltran
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AIW17837
UniProt:
A0A7Y3YZL2
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All DBs
Position
1:368450..369769
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AA seq
439 aa
AA seq
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MARFFQPKKKTQLNTKHQSLKIEKLDHHGAGIAYQNKKPIFIEGALPGEQVLAQLTESKS
KFSRATLIKVQTPSEQRVEPFCPHYQQCGGCNMQHLSSEHQQMHKQQTLSQLMSKFAGQS
LSLDAPIVGESQGYRRRARISVMVDKKTRQLKFGFRKKQSKDIVTLIHCPVLAPELDELL
PELYALLTSFSQQENIGHVELVKADNTRILVLRHLKPLKDKDHAALLEFAMLNQITLYLM
PNNEQLVLEAGEAGVYKETGVTIPFEPNNFIQVNQQVNAQMVAQALDWLALSEQDRVLDL
FCGLGNFSLPIAKQVKSVTGVEGVDEMVKKATHNAQVNQIDNAQFYQANLEQDMSGQLWA
REKFDKILLDPARAGASGMVEQVSALGATRVVYVSCNPATLARDSQSLLSQGFELKKLGM
LDMFPHTSHLESMALFVKD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtttcttccaaccgaaaaagaaaactcaactcaacactaagcatcaatcgttg
aaaatcgaaaaactcgatcatcacggtgcaggcatagcctatcaaaataagaagccaatt
tttattgaaggggcactgccgggagagcaagtgttagctcagttgactgaaagcaagagt
aagttctcacgagcgacgctgattaaggtgcaaacgccgagtgaacaacgagttgagccc
ttctgcccacattatcagcagtgtgggggctgtaatatgcagcacctgagtagtgagcac
cagcagatgcacaaacagcaaacgctaagccaattgatgagcaagtttgcaggacagagc
ctcagcttagatgccccgatagtgggtgaatcgcaaggctaccgtcgccgcgctcgcatc
agtgtcatggtggataaaaaaacgcgtcagctgaaatttggtttccgtaaaaagcagagt
aaagacatcgtcactctgattcactgccctgttttggcgccggaattggatgagctattg
ccagagttatatgcgctgctgacgagcttttctcaacaagagaatatcggccatgtcgag
ttggtgaaagctgacaacacgcgcattctggttttgcgtcatctcaagccactgaaagat
aaagatcatgctgcgctgcttgaatttgccatgctcaatcagattacgctttatctgatg
ccaaacaacgaacagctggtacttgaagccggtgaagcgggtgtttataaggaaacgggc
gtcactatcccgtttgagccaaataattttattcaagttaatcaacaagtgaatgcgcag
atggttgctcaggcgttggattggctggcgttatctgagcaagatcgagtgttagatttg
ttttgtggcttagggaacttcagcctccccatcgctaagcaggtaaaaagcgttaccggt
gttgaaggggtcgatgagatggtgaagaaagccactcataatgctcaagttaaccagatt
gataatgctcagttttatcaggcaaatttggaacaagatatgtctggtcagctctgggcg
agagaaaagtttgataaaatactgctcgatccagcacgagctggcgccagcggaatggtc
gagcaagtttctgcgctaggtgcgacaagagtcgtttatgtttcttgcaatcctgctact
ctagcccgagattctcagagcttgctaagtcaggggtttgagttaaagaaattggggatg
ttagatatgttcccccataccagtcacttagaatcaatggcgctttttgtgaaggattaa
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